RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RUBCNLQ9H714 662 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 AHSPQ9NZD4 102 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 BARX2Q9UMQ3 279 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 DMTF1Q9Y222 760 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ACOT9Q9Y305 439 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 AKAP10O43572 662 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PLD1Q13393 1074 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 GIT2Q14161 759 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TCHHL1Q5QJ38 904 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 BRINP3Q76B58 766 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ALDH16A1Q8IZ83 802 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 EID3Q8N140 333 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 OR6B3Q8NGW1 331 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 BLOC1S5Q8TDH9 187 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PTBP2Q9UKA9 531 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MLYCDO95822 493 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PECAM1P16284 738 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ITGB6P18564 788 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CPT1AP50416 773 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CDC16Q13042 620 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 MICALL2Q8IY33 904 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PACRGLQ8N7B6 248 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ABTB1Q969K4 478 aaPredicted RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TINF2Q9BSI4 451 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CSDE1O75534 798 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ENO1P06733 434 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 CTTNQ14247 550 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PTK2BQ14289 1009 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PSMD5Q16401 504 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 ZC3H12AQ5D1E8 599 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 RRM2BQ7LG56 351 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TAGAPQ8N103 731 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 PAFAH2Q99487 392 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 DHX35Q9H5Z1 703 aaKnown RBP9.07□□□□□ -0.96
COL6A5-202ENST00000312481 TRPM5Q9NZQ8 1165 aa9.07□□□□□ -0.96
COL6A5-202ENST00000312481 RBBP6Q7Z6E9 1792 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CFLARO15519 480 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 TBC1D12O60347 775 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 WDR47O94967 919 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 NR3C2P08235 984 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RRM2P31350 389 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PRKG1Q13976 671 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 INTS11Q5TA45 600 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SNRNP48Q6IEG0 339 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 C1orf228Q6PIY5 440 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PDGFCQ9NRA1 345 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 LSM7Q9UK45 103 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SIK3Q9Y2K2 1263 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RP1P56715 2156 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ESYT3A0FGR9 886 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PHF20L1A8MW92 1017 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MED24O75448 989 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 FAM163BP0C2L3 166 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 KLHL12Q53G59 568 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RBM20Q5T481 1227 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MARK2Q7KZI7 788 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 PHF13Q86YI8 300 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ART4Q93070 314 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 HPDLQ96IR7 371 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 HOPXQ9BPY8 73 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 LHX5Q9H2C1 402 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MOV10Q9HCE1 1003 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ENTPD7Q9NQZ7 604 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZNFX1Q9P2E3 1918 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZNF487B1APH4 448 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CYP26A1O43174 497 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 NTSR2O95665 410 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RPN2P04844 631 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SEC14L4Q9UDX3 406 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SIGLEC16A6NMB1 481 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 C5orf58C9J3I9 102 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ITGA2P17301 1181 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 GCLCP48506 637 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CRY1Q16526 586 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RWDD4Q6NW29 188 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RELL1Q8IUW5 271 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CYP4Z2PQ8N1L4 340 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 ZFAND2BQ8WV99 257 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 C7orf26Q96N11 449 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MPZL2O60487 215 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 TDP2O95551 362 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 STAT5AP42229 794 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 CHN2P52757 468 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 DLG1Q12959 904 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MPP3Q13368 585 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 RFTN2Q52LD8 501 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 NLRP4Q96MN2 994 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 MRPL57Q9BQC6 102 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 SEZ6LQ9BYH1 1024 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 JMJD4Q9H9V9 463 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 DDX43Q9NXZ2 648 aaKnown RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 C3orf18Q9UK00 162 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 COL2A1P02458 1487 aaPredicted RBP9.06□□□□□ -0.96
COL6A5-202ENST00000312481 H7C4K7 107 aa9.06□□□□□ -0.96
COL6A5-202ENST00000312481 TRIM13O60858 407 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms