RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 FAF2Q96CS3 445 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 GPRASP2Q96D09 838 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 NLRP4Q96MN2 994 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 RILPQ96NA2 401 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 WRNIP1Q96S55 665 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 PEBP4Q96S96 227 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 MIS12Q9H081 205 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 SDCBP2Q9H190 292 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 LHX5Q9H2C1 402 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 CDH22Q9UJ99 828 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 FZD1Q9UP38 647 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 SSX2IPQ9Y2D8 614 aa8.79□□□□□ -1
UBQLN3-201ENST00000311659 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 WDR90Q96KV7 1748 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 RLFQ13129 1914 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TTLL13PA6NNM8 815 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ADM5C9JUS6 153 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PEX1O43933 1283 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 KRT38O76015 456 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 RGS20O76081 388 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 OR6B1O95007 311 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PSAPP07602 524 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 NAMPTP43490 491 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ASPAP45381 313 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 MMRN1Q13201 1228 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 GRM1Q13255 1194 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 MTMR2Q13614 643 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 PDK3Q15120 406 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ANKRD20A4Q4UJ75 823 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TEDDM1Q5T9Z0 273 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 MAP3K21Q5TCX8 1036 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ARMC3Q5W041 872 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 DARS2Q6PI48 645 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 UNC5AQ6ZN44 842 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ATG14Q6ZNE5 492 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 XYLT1Q86Y38 959 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 BTBD9Q96Q07 612 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 CPXM1Q96SM3 734 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 CALN1Q9BXU9 219 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PORCNQ9H237 461 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 DHX33Q9H6R0 707 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 RAB6BQ9NRW1 208 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 LMCD1Q9NZU5 365 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PAK5Q9P286 719 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PCSK1NQ9UHG2 260 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 EMCNQ9ULC0 261 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ARHGAP42A6NI28 874 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 WDR46O15213 610 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 ITM2AO43736 263 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 OPHN1O60890 802 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 SIN3BO75182 1162 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 LYPLA1O75608 230 aaPredicted RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 PDE5AO76074 875 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 KLHL2O95198 593 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ASLP04424 464 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 FGF3P11487 239 aaPredicted RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 ALOX15P16050 662 aaPredicted RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 OSBPP22059 807 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 POLR2BP30876 1174 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 ARL2P36404 184 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TNFSF9P41273 254 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 RANBP1P43487 201 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 CHN2P52757 468 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 COPAP53621 1224 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 AP3M2P53677 418 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 INHBCP55103 352 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 YWHAEP62258 255 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 SNAPC2Q13487 334 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ITGA9Q13797 1035 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ACAP1Q15027 740 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 MTERF2Q49AM1 385 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 STXBP5Q5T5C0 1151 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 XRRA1Q6P2D8 792 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TRMT10BQ6PF06 316 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 DLK2Q6UY11 383 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TIFABQ6ZNK6 161 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 DENND5BQ6ZUT9 1274 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ZNF534Q76KX8 674 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 KBTBD6Q86V97 674 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 WDR75Q8IWA0 830 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 NDUFAF2Q8N183 169 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 POU5F2Q8N7G0 328 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 SLC4A11Q8NBS3 891 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 SLC26A7Q8TE54 656 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 ZC3H15Q8WU90 426 aaKnown RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 HSPH1Q92598 858 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 TMEM143Q96AN5 459 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 LRRC39Q96DD0 335 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 PRICKLE1Q96MT3 831 aaPredicted RBP8.78□□□□□ -1
UBQLN3-201ENST00000311659 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 SMYD3Q9H7B4 428 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 NDUFA13Q9P0J0 144 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 USP18Q9UMW8 372 aa8.78□□□□□ -1
UBQLN3-201ENST00000311659 POMPQ9Y244 141 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms