RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SLC11A2P49281 568 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 PTPN5P54829 565 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 CDK17Q00537 523 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 NR1I3Q14994 352 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 FBXO43Q4G163 708 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 SFMBT2Q5VUG0 894 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 BHLHA9Q7RTU4 235 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 NAP1L5Q96NT1 182 aaPredicted RBP20.69■□□□□ 0.9
VEGFB-201ENST00000309422 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 EDEM3Q9BZQ6 932 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 LMAN1LQ9HAT1 526 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 SPHK2Q9NRA0 654 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 SFMBT1Q9UHJ3 866 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 CYTH4Q9UIA0 394 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 STAP1Q9ULZ2 295 aa20.69■□□□□ 0.9
VEGFB-201ENST00000309422 HELZP42694 1942 aaKnown RBP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 TICRRQ7Z2Z1 1910 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 LAMTOR5O43504 91 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 GALR2O43603 387 aaPredicted RBP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 LATS1O95835 1130 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 EIF2DP41214 584 aaKnown RBP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 TBX4P57082 545 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 NNTQ13423 1086 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 TRIP4Q15650 581 aaPredicted RBP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 PTPN20Q4JDL3 420 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 LY6G5CQ5SRR4 150 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 FAM183BPQ6ZVS7 135 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 DENND1CQ8IV53 801 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 ADGRG2Q8IZP9 1017 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 BBS2Q9BXC9 721 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 TMEM51Q9NW97 253 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 RRN3Q9NYV6 651 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 SLC12A6Q9UHW9 1150 aa20.68■□□□□ 0.9
VEGFB-201ENST00000309422 NOCTQ9UK39 431 aaKnown RBP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.68■□□□□ 0.9
VEGFB-201ENST00000309422 LRRC53A6NM62 1247 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 TRDMT1O14717 391 aaKnown RBP20.67■□□□□ 0.9
VEGFB-201ENST00000309422 PI15O43692 258 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 APODP05090 189 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 DESP17661 470 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 NOMO3P69849 1222 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 SLC6A3Q01959 620 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 MTA1Q13330 715 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 DCAF6Q58WW2 860 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 FIGNQ5HY92 759 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 FAM102AQ5T9C2 384 aaPredicted RBP20.67■□□□□ 0.9
VEGFB-201ENST00000309422 TXNDC11Q6PKC3 985 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 TPGS1Q6ZTW0 290 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 VPS36Q86VN1 386 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 DQX1Q8TE96 717 aaKnown RBP20.67■□□□□ 0.9
VEGFB-201ENST00000309422 SLC20A1Q8WUM9 679 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 DDX1Q92499 740 aaKnown RBP20.67■□□□□ 0.9
VEGFB-201ENST00000309422 RNF34Q969K3 372 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 PAXBP1Q9Y5B6 917 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 ANAPC1Q9H1A4 1944 aa20.67■□□□□ 0.9
VEGFB-201ENST00000309422 NEDD8-MDP1E9PL57 170 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 HOXC11O43248 304 aaPredicted RBP20.66■□□□□ 0.9
VEGFB-201ENST00000309422 MSI1O43347 362 aaKnown RBP20.66■□□□□ 0.9
VEGFB-201ENST00000309422 ATG13O75143 517 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 DAB1O75553 588 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 ERBB2P04626 1255 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 SLC2A3P11169 496 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 SND1Q7KZF4 910 aaKnown RBP eCLIP20.66■□□□□ 0.9
VEGFB-201ENST00000309422 SLC26A9Q7LBE3 791 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
VEGFB-201ENST00000309422 WDTC1Q8N5D0 677 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 CPA5Q8WXQ8 436 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 CLDN23Q96B33 292 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 PNKPQ96T60 521 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 CHRDQ9H2X0 955 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 DEC1Q9P2X7 70 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 TLR6Q9Y2C9 796 aa20.66■□□□□ 0.9
VEGFB-201ENST00000309422 MTF2Q9Y483 593 aaPredicted RBP20.66■□□□□ 0.9
VEGFB-201ENST00000309422 ANKRD62A6NC57 917 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 OTOL1A6NHN0 477 aaPredicted RBP20.65■□□□□ 0.9
VEGFB-201ENST00000309422 CALB1P05937 261 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 TNFAIP3P21580 790 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 SCNN1AP37088 669 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 CCR3P51677 355 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 FMO1Q01740 532 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 RING1Q06587 406 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 TRIM14Q14142 442 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 TDRD12Q587J7 1177 aaKnown RBP20.65■□□□□ 0.9
VEGFB-201ENST00000309422 TMEM196Q5HYL7 178 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 OLFML1Q6UWY5 402 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 Q6ZNB5 142 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 C1orf210Q8IVY1 113 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 AGPAT1Q99943 283 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 ARHGEF4Q9NR80 690 aa20.65■□□□□ 0.9
VEGFB-201ENST00000309422 AGO1Q9UL18 857 aaKnown RBP20.65■□□□□ 0.9
VEGFB-201ENST00000309422 A0A1W2PQJ5 194 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 GOLGA8SH3BPF8 625 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 GABBR2O75899 941 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 TYRP14679 529 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 RNASE9P60153 205 aaKnown RBP20.64■□□□□ 0.89
VEGFB-201ENST00000309422 KLHL30Q0D2K2 578 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 TSR1Q2NL82 804 aaKnown RBP20.64■□□□□ 0.89
VEGFB-201ENST00000309422 GRAMD4Q6IC98 578 aa20.64■□□□□ 0.89
VEGFB-201ENST00000309422 RHBDF2Q6PJF5 856 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms