RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TUBB8Q3ZCM7 444 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 GJB7Q6PEY0 223 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 PACS1Q6VY07 963 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 C4orf50Q6ZRC1 276 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 CCDC149Q6ZUS6 474 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 USP51Q70EK9 711 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 ACOT1Q86TX2 421 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 SLC4A11Q8NBS3 891 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 FAM174AQ8TBP5 190 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 SHC3Q92529 594 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 ARHGEF2Q92974 986 aaKnown RBP8.65□□□□□ -1.03
CHD6-201ENST00000309279 HLA-CQ95604 372 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 TMEM176AQ96HP8 235 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 STK33Q9BYT3 514 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 DNAI2Q9GZS0 605 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 NACA2Q9H009 215 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 S1PR5Q9H228 398 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 GANQ9H2C0 597 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 UBE2ZQ9H832 354 aaPredicted RBP8.65□□□□□ -1.03
CHD6-201ENST00000309279 SFXN1Q9H9B4 322 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 AASDHPPTQ9NRN7 309 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 ZDHHC7Q9NXF8 308 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 DNAJC12Q9UKB3 198 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 KIAA1257Q9ULG3 409 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 PCDHB5Q9Y5E4 795 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 MYH10P35580 1976 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 GREB1Q4ZG55 1949 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 C2orf16Q68DN1 1984 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 FAM221AA4D161 298 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 AKR1B15C9JRZ8 316 aaPredicted RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 H0YHG0 523 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 ASMTLO95671 621 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 APBB3O95704 486 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 C8AP07357 584 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 PAEPP09466 180 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 HNRNPA1P09651 372 aaKnown RBP eCLIP8.64□□□□□ -1.03
CHD6-201ENST00000309279 HAPLN1P10915 354 aaPredicted RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 TRIM21P19474 475 aaKnown RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 PBX1P40424 430 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 MAGEA11P43364 429 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 KLK7P49862 253 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 PDE6CP51160 858 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 ITIH3Q06033 890 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 CCDC142Q17RM4 750 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 MDH1BQ5I0G3 518 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 LIN9Q5TKA1 542 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 TMEM270Q6UE05 265 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 PAQR9Q6ZVX9 377 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 CEP68Q76N32 757 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 TMEM151BQ8IW70 566 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 SLC44A2Q8IWA5 706 aaPredicted RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 FUKQ8N0W3 1084 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 DCLK2Q8N568 766 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 C12orf29Q8N999 325 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 ZNF454Q8N9F8 522 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 SMRP1Q8NCR6 262 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 SLC7A14Q8TBB6 771 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 MYLPFQ96A32 169 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 CEP295NLQ96MC4 621 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 HNRNPABQ99729 332 aaKnown RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 LSM14BQ9BX40 385 aaKnown RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 B3GNT5Q9BYG0 378 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 ADAM7Q9H2U9 754 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 PDP2Q9P2J9 529 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
CHD6-201ENST00000309279 PHTF1Q9UMS5 762 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 PCDHB4Q9Y5E5 795 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 INSL5Q9Y5Q6 135 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 NOTCH4Q99466 2003 aa8.64□□□□□ -1.03
CHD6-201ENST00000309279 CCDC195A0A1B0GUA6 201 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 A0A1B0GVC2 190 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 M0QX08 132 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 PRRG1O14668 218 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 EPHB6O15197 1021 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 KLHL41O60662 606 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 RFPL2O75678 378 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 CYP17A1P05093 508 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 RPS2P15880 293 aaKnown RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 CYP2F1P24903 491 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 MAPK9P45984 424 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 LIMK1P53667 647 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 JAM2P57087 298 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 CYP27A1Q02318 531 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 ORC1Q13415 861 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 C2orf27AQ580R0 203 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 FIGNQ5HY92 759 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 PPM1LQ5SGD2 360 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 INTS11Q5TA45 600 aaKnown RBP8.63□□□□□ -1.03
CHD6-201ENST00000309279 ARHGAP17Q68EM7 881 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 SARM1Q6SZW1 724 aa8.63□□□□□ -1.03
CHD6-201ENST00000309279 NEK10Q6ZWH5 1172 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms