RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 LSAMPQ13449 338 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 RAB3IL1Q8TBN0 382 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 KCNK16Q96T55 309 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 POPDC2Q9HBU9 364 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SLC17A6Q9P2U8 582 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SDR42E2A6NKP2 422 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NEMP1O14524 444 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 BUD23O43709 281 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 PLA2G6O60733 806 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 PABPC4LP0CB38 370 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 AOC1P19801 751 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF132P52740 706 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RARS2Q5T160 578 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CES4AQ5XG92 561 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 WDR49Q8IV35 697 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF180Q9UJW8 692 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ARHGAP26Q9UNA1 814 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SORCS3Q9UPU3 1222 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 DGKIO75912 1065 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 IL1BP01584 269 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SPATA31D3P0C874 917 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CRHR1P34998 444 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RGS2P41220 211 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ALDH1A3P47895 512 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NUDT2P50583 147 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ITGA9Q13797 1035 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 TEX44Q53QW1 395 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SNRNP48Q6IEG0 339 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SPATA31D4Q6ZUB0 917 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ARCQ7LC44 396 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RNF148Q8N7C7 305 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NSUN6Q8TEA1 469 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RXFP2Q8WXD0 754 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CLMNQ96JQ2 1002 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 FRMD8Q9BZ67 464 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NDUFA13Q9P0J0 144 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NOP56O00567 594 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 IRF6O14896 467 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 BIRC5O15392 142 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 GPD1P21695 349 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 MSX2P35548 267 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SERPINB5P36952 375 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RGS7P49802 495 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 AP3M2P53677 418 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CCNIQ14094 377 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 TBC1D25Q3MII6 688 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 SH2D5Q6ZV89 423 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 UNC5BQ8IZJ1 945 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 MPP5Q8N3R9 675 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 PRPF31Q8WWY3 499 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 PRPF18Q99633 342 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 CHCHD3Q9NX63 227 aaKnown RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 MAGED2Q9UNF1 606 aaPredicted RBP11.51□□□□□ -0.57
PTPN7-201ENST00000309017 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 BTAF1O14981 1849 aa11.51□□□□□ -0.57
PTPN7-201ENST00000309017 GOLGA8QA0A0J9YX86 632 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 GOLGA8OA6NCC3 632 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 GOLGA8NF8WBI6 632 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 TPP1O14773 563 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CHRNA5P30532 468 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 MRPS22P82650 360 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 ENPEPQ07075 957 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CYTH1Q15438 398 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 VSIG10LQ86VR7 867 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CMASQ8NFW8 434 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 RNPEPQ9H4A4 650 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 LOXHD1Q8IVV2 1947 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SLC15A5A6NIM6 579 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 INO80B-WBP1J3KQ70 363 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 GLRA3O75311 464 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SERPINE1P05121 402 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 ATP5BP06576 529 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 FDFT1P37268 417 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SCNN1BP51168 640 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 XYLT1Q86Y38 959 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 C10orf107Q8IVU9 208 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SREK1Q8WXA9 508 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 PGBD4Q96DM1 585 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 CDHR1Q96JP9 859 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 INO80BQ9C086 356 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-201ENST00000309017 PORCNQ9H237 461 aa11.5□□□□□ -0.57
PTPN7-201ENST00000309017 SEPT10Q9P0V9 454 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms