RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RNF38Q9H0F5 515 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SMOC2Q9H3U7 446 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 SIK3Q9Y2K2 1263 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 USP15Q9Y4E8 981 aaPredicted RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 ACACBO00763 2458 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 MAP1BP46821 2468 aaKnown RBP5.25□□□□□ -1.57
CKS1B-201ENST00000308987 CHD6Q8TD26 2715 aa5.25□□□□□ -1.57
CKS1B-201ENST00000308987 NRCAMQ92823 1304 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 FRYQ5TBA9 3013 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 WDFY3Q8IZQ1 3526 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 hCG_1642624A0A1W2PR95 340 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 GRID2IPA4D2P6 1211 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TRIM49BA6NDI0 452 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 GOLGA6BA6NDN3 693 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 BTNL10A8MVZ5 291 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NOP56O00567 594 aaKnown RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 PER2O15055 1255 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 ADAMTS3O15072 1205 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NCK2O43639 380 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 FZD7O75084 574 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 N4BP1O75113 896 aaKnown RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 GNA14O95837 355 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 GNAT1P11488 350 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NCAM1P13591 858 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 PAFAH1B1P43034 410 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TNNT3P45378 269 aaPredicted RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NDUFV1P49821 464 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 PMS1P54277 932 aaKnown RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 ASIC1P78348 528 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 MRPS6P82932 125 aaKnown RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NEDD9Q14511 834 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 UBE2SQ16763 222 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM266Q2M3C6 531 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 C10orf76Q5T2E6 689 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 FAM102BQ5T8I3 360 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 HLA-DQA1Q5Y7H0 255 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 ANKRD40Q6AI12 368 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 SYCE2Q6PIF2 218 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TSHZ1Q6ZSZ6 1077 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NEK8Q86SG6 692 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 CD302Q8IX05 232 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 CMTR2Q8IYT2 770 aaKnown RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 SAMD3Q8N6K7 520 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 CYP2W1Q8TAV3 490 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TSG101Q99816 390 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 SELENOOQ9BVL4 669 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 FAM49AQ9H0Q0 323 aaPredicted RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 S1PR5Q9H228 398 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TMEM60Q9H2L4 133 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 NDST4Q9H3R1 872 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 SPATA6Q9NWH7 488 aaPredicted RBP5.24□□□□□ -1.57
CKS1B-201ENST00000308987 ST6GALNAC2Q9UJ37 374 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 GGA2Q9UJY4 613 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 PADI3Q9ULW8 664 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 FAM50BQ9Y247 325 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 PCDHA13Q9Y5I0 950 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 UBIAD1Q9Y5Z9 338 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 ASPMQ8IZT6 3477 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 TRIP11Q15643 1979 aa5.24□□□□□ -1.57
CKS1B-201ENST00000308987 IGSF9BQ9UPX0 1349 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 HIDE1A8MVS5 230 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 AGPSO00116 658 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 PES1O00541 588 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 HSF2BPO75031 334 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 STAM2O75886 525 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GSNP06396 782 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ASGR2P07307 311 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GCFC2P16383 781 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 AVPR2P30518 371 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CTSKP43235 329 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 MAGEA1P43355 309 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 KIF11P52732 1056 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GYS2P54840 703 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 IGBP1P78318 339 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CLCQ05315 142 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 STK4Q13043 487 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ITGB3BPQ13352 177 aaPredicted RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 AUHQ13825 339 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 PLCB4Q15147 1175 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CDSNQ15517 529 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 DUSP6Q16828 381 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 INF2Q27J81 1249 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ASTE1Q2TB18 679 aaPredicted RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 GNPTABQ3T906 1256 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 TTC31Q49AM3 519 aaPredicted RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CFAP221Q4G0U5 840 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 HYIQ5T013 277 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 CDCP2Q5VXM1 449 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 TDRD10Q5VZ19 366 aaKnown RBP5.23□□□□□ -1.57
CKS1B-201ENST00000308987 MCTP2Q6DN12 878 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 TAF2Q6P1X5 1199 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 PDXDC1Q6P996 788 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 LRRC55Q6ZSA7 311 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 B4GALNT4Q76KP1 1039 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 ASCL5Q7RTU5 278 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
CKS1B-201ENST00000308987 SUGP1Q8IWZ8 645 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms