RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 BBS2Q9BXC9 721 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 SIX2Q9NPC8 291 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 AJAP1Q9UKB5 411 aaPredicted RBP20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 GMEB2Q9UKD1 530 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 AGO1Q9UL18 857 aaKnown RBP20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 CNOT1A5YKK6 2376 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 M0QYV0 167 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 DCLK1O15075 740 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 LRP3O75074 770 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 KLF8O95600 359 aaPredicted RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 FGFR1OPO95684 399 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 CORO1AP31146 461 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 ID4P47928 161 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 STILQ15468 1287 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 PLK5Q496M5 336 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 BTBD8Q5XKL5 378 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 MSANTD2Q6P1R3 559 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 TSTD1Q8NFU3 115 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 EDEM1Q92611 657 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 HSFY1Q96LI6 401 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 DUSP15Q9H1R2 295 aaPredicted RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 UBE2TQ9NPD8 197 aaPredicted RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 DNAJC17Q9NVM6 304 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 PLK2Q9NYY3 685 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 WDR35Q9P2L0 1181 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 CYTH4Q9UIA0 394 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 RAB23Q9ULC3 237 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 CLEC4EQ9ULY5 219 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 TNRC6BQ9UPQ9 1833 aaKnown RBP20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 THADAQ6YHU6 1953 aa20.75■□□□□ 0.91
PDZRN3-202ENST00000308537 LAMA1P25391 3075 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 SLC12A8A0AV02 714 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 GTPBP10A4D1E9 387 aaKnown RBP20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 TBC1D3BA6NDS4 549 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 PIK3R2O00459 728 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 FYNP06241 537 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 HMBSP08397 361 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 LCP1P13796 627 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 MIIPQ5JXC2 388 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 CEP68Q76N32 757 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 CACNA2D4Q7Z3S7 1137 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 FMNL3Q8IVF7 1028 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 CPXM2Q8N436 756 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 GPR161Q8N6U8 529 aaKnown RBP20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 KCNV2Q8TDN2 545 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 ACOX2Q99424 681 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 SFMBT1Q9UHJ3 866 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 STOML2Q9UJZ1 356 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 ZNF510Q9Y2H8 683 aa20.74■□□□□ 0.91
PDZRN3-202ENST00000308537 EPN2O95208 641 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 IGLV3-27P01718 113 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 PON1P27169 355 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 DGKEP52429 567 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 MEA1Q16626 185 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 C10orf76Q5T2E6 689 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 EGFLAMQ63HQ2 1017 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 GRAMD4Q6IC98 578 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 ANO7Q6IWH7 933 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 DENND1BQ6P3S1 775 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 RBM43Q6ZSC3 357 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 DENND1CQ8IV53 801 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 SIX6OS1Q8N1H7 587 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 GPT2Q8TD30 523 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 IRGQQ8WZA9 623 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 SHC3Q92529 594 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 PLD4Q96BZ4 506 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 LOXL4Q96JB6 756 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 IPO9Q96P70 1041 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 TPSD1Q9BZJ3 242 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 DCLK3Q9C098 648 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 THAP9Q9H5L6 903 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 ABCC13Q9NSE7 274 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 SEMA4GQ9NTN9 838 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 APEX2Q9UBZ4 518 aa20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.73■□□□□ 0.91
PDZRN3-202ENST00000308537 CKAP5Q14008 2032 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 A0A1W2PQF6 199 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 MSI1O43347 362 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 ERCC5P28715 1186 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 MFAP3P55082 362 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 CSRP2Q16527 193 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 PLA2G2CQ5R387 149 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 RSRC2Q7L4I2 434 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 ZNF513Q8N8E2 541 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 ZNF606Q8WXB4 792 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 BHMTQ93088 406 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 XPO6Q96QU8 1125 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 SLC4A5Q9BY07 1137 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 OLA1Q9NTK5 396 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 STRIP2Q9ULQ0 834 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 SLC27A6Q9Y2P4 619 aa20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 HBS1LQ9Y450 684 aaKnown RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 MUC22E2RYF6 1773 aaPredicted RBP20.72■□□□□ 0.91
PDZRN3-202ENST00000308537 BCKDHBP21953 392 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 CHKAP35790 457 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 DGKGP49619 791 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 EXOC3L4Q17RC7 722 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 RSPO4Q2I0M5 234 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms