RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 DUSP4Q13115 394 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MMRN1Q13201 1228 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MTMR3Q13615 1198 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 DPYSL3Q14195 570 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PPP2R5EQ16537 467 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MGAT5BQ3V5L5 792 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 GLE1Q53GS7 698 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 BSPRYQ5W0U4 402 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 KIAA1841Q6NSI8 718 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 WDR93Q6P2C0 686 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SCD5Q86SK9 330 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FAM131BQ86XD5 332 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 VPS52Q8N1B4 723 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 NUP93Q8N1F7 819 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 KCTD6Q8NC69 237 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SLC7A14Q8TBB6 771 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SP7Q8TDD2 431 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TEKT4Q8WW24 435 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ATG4AQ8WYN0 398 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SEPT5Q99719 369 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FAM118BQ9BPY3 351 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 DCLK3Q9C098 648 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 IRF2BPLQ9H1B7 796 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SLITRK6Q9H5Y7 841 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 NMUR1Q9HB89 426 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 WDR6Q9NNW5 1121 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TMPRSS4Q9NRS4 437 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PIGVQ9NUD9 493 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 OSER1Q9NX31 292 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 IL37Q9NZH6 218 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 COX16Q9P0S2 106 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 STIM2Q9P246 746 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 STAP1Q9ULZ2 295 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 GBF1Q92538 1859 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 I6L893 689 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 CAPN9O14815 690 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TTI1O43156 1089 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FGF18O76093 207 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SEC24AO95486 1093 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ATP2A2P16615 1042 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ATF6P18850 670 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 IL4RP24394 825 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 CHRNA3P32297 505 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 RDXP35241 583 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 COILP38432 576 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PTGIRP43119 386 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 KCNJ1P48048 391 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 CLCN6P51797 869 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 YWHAGP61981 247 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 NME3Q13232 169 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TRADDQ15628 312 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 BOLA3Q53S33 107 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ERMARDQ5T6L9 678 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TAC4Q86UU9 113 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PYROXD2Q8N2H3 581 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FAM71BQ8TC56 605 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 C2orf15Q8WU43 125 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MAGOHBQ96A72 148 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PGAP3Q96FM1 320 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 KCTD15Q96SI1 283 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SLC9A7Q96T83 725 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 NCAPGQ9BPX3 1015 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 TRIM51Q9BSJ1 452 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ZBED2Q9BTP6 218 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 LRRC19Q9H756 370 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PCDH18Q9HCL0 1135 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ANLNQ9NQW6 1124 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PLSCR2Q9NRY7 297 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 PCYOX1Q9UHG3 505 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MTUS1Q9ULD2 1270 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 FZD10Q9ULW2 581 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 AP4E1Q9UPM8 1137 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SCML2Q9UQR0 700 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 INSL6Q9Y581 213 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SLC4A7Q9Y6M7 1214 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 ESYT3A0FGR9 886 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 FAM92AA1XBS5 289 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 PROB1E7EW31 1015 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 LILRB3O75022 631 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 ABLIM3O94929 683 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 SEC31AO94979 1220 aaKnown RBP7.24□□□□□ -1.25
PTCD2-201ENST00000308077 ARHGEF15O94989 841 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 IGLV3-25P01717 112 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 URODP06132 367 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DESP17661 470 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DNAJB2P25686 324 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 L1CAMP32004 1257 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 PPM1AP35813 382 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 CETN2P41208 172 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 GUCY2DQ02846 1103 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DEUP1Q05D60 604 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 SNX1Q13596 522 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 DPYSL2Q16555 572 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 ODF2Q5BJF6 829 aa7.24□□□□□ -1.25
PTCD2-201ENST00000308077 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms