RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LRRC19Q9H756 370 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 LRFN2Q9ULH4 789 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CRYL1Q9Y2S2 319 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SOWAHDA6NJG2 315 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SERPINA6P08185 405 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 S100A1P23297 94 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PGM1P36871 562 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TTPAP49638 278 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GPS1Q13098 491 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TEAD4Q15561 434 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NET1Q7Z628 596 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 METTL16Q86W50 562 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 KYQ8NBH2 561 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 WNK4Q96J92 1243 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MXRA8Q9BRK3 442 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 COG4Q9H9E3 785 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PLK2Q9NYY3 685 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZNRF3Q9ULT6 936 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GYPCP04921 128 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MYL3P08590 195 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZSCAN5DPP0CG00 497 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PCNAP12004 261 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 FASP25445 335 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CYB5R4Q7L1T6 521 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.13□□□□□ -1.75
USH2A-201ENST00000307340 TRABDQ9H4I3 376 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 FBXO2Q9UK22 296 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 SLC4A7Q9Y6M7 1214 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATP2C2O75185 946 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 IL1R1P14778 569 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZNF12P17014 697 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PTPN7P35236 360 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TNFAIP8L3Q5GJ75 292 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NAA35Q5VZE5 725 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TTC23Q5W5X9 447 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MAML1Q92585 1016 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 MAD2L2Q9UI95 211 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 FAM92AA1XBS5 289 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PDE2AO00408 941 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 CXCL11O14625 94 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ACSL3O95573 720 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 HSD17B2P37059 387 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SNAP25P60880 206 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SULT2A1Q06520 285 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TMEM132DQ14C87 1099 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 METTL2AQ96IZ6 378 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 IDI2Q9BXS1 227 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 KRT82Q9NSB4 513 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 EURLQ9NYK6 297 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SSC5DA1L4H1 1573 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PEPDP12955 493 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 HMOX2P30519 316 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RPL9P32969 192 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 ASMTP46597 345 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DCTN2Q13561 401 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 LBRQ14739 615 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 ACOX1Q15067 660 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CNPY1Q3B7I2 92 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DYMQ7RTS9 669 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RELL1Q8IUW5 271 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZNF34Q8IZ26 560 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CLEC4FQ8N1N0 589 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATXN10Q9UBB4 475 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SPATA31A1Q5TZJ5 1347 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 CETPP11597 493 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATN1P54259 1190 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 ACTR3P61158 418 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 KRT17Q04695 432 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ADCK5Q3MIX3 580 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TMEM26Q6ZUK4 368 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ZCCHC9Q8N567 271 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 PACRGLQ8N7B6 248 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 HTATIP2Q9BUP3 242 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ATP13A1Q9HD20 1204 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 VTA1Q9NP79 307 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RRAGDQ9NQL2 400 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 IMPAD1Q9NX62 359 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 hCG_1642624A0A1W2PR95 340 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PSMD11O00231 422 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TMED10P49755 219 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 TRIM68Q6AZZ1 485 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 ACAD10Q6JQN1 1059 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 EXOC3L1Q86VI1 746 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 LRRC52Q8N7C0 313 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 FAM151AQ8WW52 585 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PCBD2Q9H0N5 130 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 RIOX1Q9H6W3 641 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 WDR41Q9HAD4 459 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 USP20Q9Y2K6 914 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PLIN4Q96Q06 1357 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 TMEM191CA6NGB0 347 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DAB1O75553 588 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 IPO13O94829 963 aaKnown RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 SLC2A4P14672 509 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 NUP62P37198 522 aaPredicted RBP4.13□□□□□ -1.75
USH2A-201ENST00000307340 NCALDP61601 193 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 PSPHP78330 225 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 GRIK2Q13002 908 aa4.13□□□□□ -1.75
USH2A-201ENST00000307340 DGUOKQ16854 277 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms