RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 DAW1Q8N136 415 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 CNTD1Q8N815 330 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 KYQ8NBH2 561 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 SEMA4DQ92854 862 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 KAT5Q92993 513 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 CCDC97Q96F63 343 aaPredicted RBP5.56□□□□□ -1.52
USP8-201ENST00000307179 CLPTM1LQ96KA5 538 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 PFDN4Q9NQP4 134 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 DDX18Q9NVP1 670 aaKnown RBP5.56□□□□□ -1.52
USP8-201ENST00000307179 SUCOQ9UBS9 1254 aaKnown RBP5.56□□□□□ -1.52
USP8-201ENST00000307179 AGTPBP1Q9UPW5 1226 aa5.56□□□□□ -1.52
USP8-201ENST00000307179 GNEQ9Y223 722 aaKnown RBP5.56□□□□□ -1.52
USP8-201ENST00000307179 TCRBV5S1A1TA0A578 114 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 KBTBD13C9JR72 458 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 KPNA4O00629 521 aaPredicted RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 SNAP91O60641 907 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C1QAP02745 245 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GARSP41250 739 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 ELK3P41970 407 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 SLC1A6P48664 564 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 MRPS5P82675 430 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 ROR1Q01973 937 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GRM1Q13255 1194 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 FRG1Q14331 258 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 MAPRE2Q15555 327 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CEP55Q53EZ4 464 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 KRT27Q7Z3Y8 459 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GPR180Q86V85 440 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 FBXO27Q8NI29 283 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 DEPTORQ8TB45 409 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 RDH11Q8TC12 318 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TRUB1Q8WWH5 349 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 PRPF31Q8WWY3 499 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 CCDC138Q96M89 665 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 PRPF18Q99633 342 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 BCL7BQ9BQE9 202 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 MRM3Q9HC36 420 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 HOMER2Q9NSB8 354 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 ARHGEF38Q9NXL2 777 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 VTI1BQ9UEU0 232 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 PCDHGC3Q9UN70 934 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TRIM43BA6NCK2 446 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C3orf70A6NLC5 250 aaPredicted RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 KPNA7A9QM74 516 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CNOT3O75175 753 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 OCM2P0CE71 109 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 OCMP0CE72 109 aaPredicted RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 TGM2P21980 687 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 DCKP27707 260 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GNA15P30679 374 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 NEK2P51955 445 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 JAK3P52333 1124 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 ZNF132P52740 706 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 SLC25A3Q00325 362 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 OTUD4Q01804 1114 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 UBAP2LQ14157 1087 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 DPYSL3Q14195 570 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 IL23RQ5VWK5 629 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 STEAP4Q687X5 459 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TTBK2Q6IQ55 1244 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TMEM53Q6P2H8 277 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C16orf46Q6P387 395 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TMEM179Q6ZVK1 233 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CYP2U1Q7Z449 544 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GIPC3Q8TF64 312 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CDKL2Q92772 493 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TSPAN18Q96SJ8 248 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 PSD2Q9BQI7 771 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C11orf70Q9BRQ4 267 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CBWD1Q9BRT8 395 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 WDR83Q9BRX9 315 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 CD320Q9NPF0 282 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TBX20Q9UMR3 447 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 DNAJC16Q9Y2G8 782 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TMEM98Q9Y2Y6 226 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 PCDHB12Q9Y5F1 795 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 PROCP04070 461 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 MLNP12872 115 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CDH3P22223 829 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 ME2P23368 584 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 HALP42357 657 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 IDH3AP50213 366 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 EPHB1P54762 984 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 ATP6V0D1P61421 351 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 GRSF1Q12849 480 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP8-201ENST00000307179 CUL2Q13617 745 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TUBA3CQ13748 450 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 BRDTQ58F21 947 aaPredicted RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 PIGGQ5H8A4 983 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 KRT80Q6KB66 452 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C3orf67Q6ZVT6 689 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 C4orf19Q8IY42 314 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TTC30BQ8N4P2 665 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 TMEM35BQ8NCS4 154 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 ISL2Q96A47 359 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 DNAJC1Q96KC8 554 aaKnown RBP5.55□□□□□ -1.52
USP8-201ENST00000307179 SNX27Q96L92 541 aa5.55□□□□□ -1.52
USP8-201ENST00000307179 CNBD2Q96M20 576 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms