RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 WDR27A2RRH5 827 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ALOX15BO15296 676 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 OAS1P00973 400 aaKnown RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 SNRPAP09012 282 aaKnown RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 LY6KQ17RY6 165 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ANO4Q32M45 955 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ACOT1Q86TX2 421 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ANKRD36BP1Q96IX9 119 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 TMEM109Q9BVC6 243 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MROH8Q9H579 483 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ADA2Q9NZK5 511 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 KCND2Q9NZV8 630 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 LRCH1Q9Y2L9 728 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 LRCH4O75427 683 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ERVK-10P10266 1014 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 KLRC2P26717 231 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 GCNT1Q02742 428 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MOGSQ13724 837 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 NFIL3Q16649 462 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 TMEM259Q4ZIN3 620 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 SH2D4BQ5SQS7 431 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 PNPLA1Q8N8W4 532 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 CAB39LQ9H9S4 337 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 MTO1Q9Y2Z2 717 aaKnown RBP15.09■□□□□ 0.01
PTPN9-201ENST00000306726 ZNF711Q9Y462 761 aa15.09■□□□□ 0.01
PTPN9-201ENST00000306726 TMEM191CA6NGB0 347 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 CAPN8A6NHC0 703 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 C2CD2LO14523 706 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 CSPG5O95196 566 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 KDELR1P24390 212 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 MRPS22P82650 360 aaKnown RBP15.08■□□□□ 0.01
PTPN9-201ENST00000306726 NRF1Q16656 503 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 FASTKD1Q53R41 847 aaKnown RBP15.08■□□□□ 0.01
PTPN9-201ENST00000306726 N4BP2L1Q5TBK1 243 aaPredicted RBP15.08■□□□□ 0.01
PTPN9-201ENST00000306726 ATG16L1Q676U5 607 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.08■□□□□ 0.01
PTPN9-201ENST00000306726 ULK2Q8IYT8 1036 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 ICA1LQ8NDH6 482 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 NSUN6Q8TEA1 469 aaKnown RBP15.08■□□□□ 0.01
PTPN9-201ENST00000306726 ACAD9Q9H845 621 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 PCDH9Q9HC56 1237 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 SNX9Q9Y5X1 595 aa15.08■□□□□ 0.01
PTPN9-201ENST00000306726 NPTXRO95502 500 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 SLC4A1P02730 911 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 ANPEPP15144 967 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 NUDT2P50583 147 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 DSG1Q02413 1049 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 PDCD2Q16342 344 aaPredicted RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 XRRA1Q6P2D8 792 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 UTS2BQ765I0 119 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 C4orf19Q8IY42 314 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 REPS2Q8NFH8 660 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 VTI1AQ96AJ9 217 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 SENP1Q9P0U3 644 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 PDHXO00330 501 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 HCRTO43612 131 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 KRT38O76015 456 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 KRT7P08729 469 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 PEX2P28328 305 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 CDKN2BP42772 138 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 DEFB115Q30KQ5 88 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 HABP4Q5JVS0 413 aaKnown RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 ST13P4Q8IZP2 240 aaPredicted RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 RYBPQ8N488 228 aaPredicted RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 MIPOL1Q8TD10 442 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 GRIP2Q9C0E4 1043 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 KLC2Q9H0B6 622 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 WWP1Q9H0M0 922 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 VCX3BQ9H321 246 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 CCDC134Q9H6E4 229 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 WDR55Q9H6Y2 383 aaPredicted RBP15.08■□□□□ 0
PTPN9-201ENST00000306726 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
PTPN9-201ENST00000306726 ITM2AO43736 263 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 PRKCBP05771 671 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 POU5F1BQ06416 359 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 TREML2Q5T2D2 321 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 EEF1DP3Q658K8 133 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 FOXR2Q6PJQ5 311 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 ZBTB8OSQ8IWT0 167 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 DIS3LQ8TF46 1054 aaKnown RBP15.07■□□□□ 0
PTPN9-201ENST00000306726 BRI3BPQ8WY22 251 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 ATP2A3Q93084 1043 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 ZNF333Q96JL9 665 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 CCNB1P14635 433 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 RAG1P15918 1043 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 ETFBP38117 255 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 CASP2P42575 452 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 PIGHQ14442 188 aaPredicted RBP15.07■□□□□ 0
PTPN9-201ENST00000306726 KIAA0319LQ8IZA0 1049 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 RNF34Q969K3 372 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 NIF3L1Q9GZT8 377 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 RPF1Q9H9Y2 349 aaKnown RBP15.07■□□□□ 0
PTPN9-201ENST00000306726 STAMBPO95630 424 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 AMHP03971 560 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 TM4SF4P48230 202 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 STAT5BP51692 787 aa15.07■□□□□ 0
PTPN9-201ENST00000306726 SPDYCQ5MJ68 293 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms