RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SOCS4Q8WXH5 440 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 YME1L1Q96TA2 773 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 HAO1Q9UJM8 370 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MRC1P22897 1456 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 NCF1BA6NI72 391 aaPredicted RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 NCF1CA8MVU1 366 aaPredicted RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 RARAP10276 462 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 NCF1P14598 390 aaPredicted RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 HPCAP84074 193 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 PPP4R4Q6NUP7 873 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 HTR3CQ8WXA8 447 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 RAB21Q9UL25 225 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 HMGCRP04035 888 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 OCM2P0CE71 109 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 OCMP0CE72 109 aaPredicted RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 NQO1P15559 274 aaKnown RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 RPL21P46778 160 aaKnown RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 SLC6A3Q01959 620 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 BTKQ06187 659 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 ACVR2BQ13705 512 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MFSD7Q6UXD7 560 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 THUMPD3Q9BV44 507 aaKnown RBP16.39■□□□□ 0.21
USP42-201ENST00000306177 ZMYM2Q9UBW7 1377 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 PSMA4P25789 261 aaKnown RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 PSEN2P49810 448 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 BMPR2Q13873 1038 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 TMEM154Q6P9G4 183 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 USP50Q70EL3 339 aaPredicted RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 YIPF2Q9BWQ6 316 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 SLC24A3Q9HC58 644 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CYP39A1Q9NYL5 469 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 UBP1Q9NZI7 540 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 APPL1Q9UKG1 709 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CBX4O00257 560 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 EFCAB14O75071 495 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 ELK3P41970 407 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 HSPA13P48723 471 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CDH8P55286 799 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 TMC3Q7Z5M5 1100 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 GLIS3Q8NEA6 775 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 KAT2BQ92831 832 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CYP4F12Q9HCS2 524 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 TISP43B9A030 160 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 LZTS3O60299 673 aaPredicted RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 KCNA4P22459 653 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 MAPK1P28482 360 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 ADCYAP1R1P41586 468 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 TBX4P57082 545 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 PLOD1Q02809 727 aaPredicted RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 ZNF284Q2VY69 593 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 ILDR2Q71H61 639 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 HES6Q96HZ4 224 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 TBC1D12O60347 775 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 LGALS2P05162 132 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 MPOP05164 745 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 BGNP21810 368 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CALB2P22676 271 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CASP5P51878 434 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 ARMC6Q6NXE6 501 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 FAM9CQ8IZT9 166 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 CELF6Q96J87 481 aaKnown RBP16.38■□□□□ 0.21
USP42-201ENST00000306177 PLEKHA8Q96JA3 519 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 TMEM120AQ9BXJ8 343 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 ZCWPW1Q9H0M4 648 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 V9GYQ6 96 aa16.38■□□□□ 0.21
USP42-201ENST00000306177 H3BQF6 201 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 ENDOD1O94919 500 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 PRKCIP41743 596 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 CSHL1Q14406 222 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 ITIH5Q86UX2 942 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SCUBE3Q8IX30 993 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SERPINB11Q96P15 392 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.37■□□□□ 0.21
USP42-201ENST00000306177 NFASCO94856 1347 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 PLA2G6O60733 806 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 RAP1GDS1P52306 607 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
USP42-201ENST00000306177 TRHDEQ9UKU6 1024 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 APOA1P02647 267 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 PPIL2Q13356 520 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 DDX39BQ13838 428 aaKnown RBP16.37■□□□□ 0.21
USP42-201ENST00000306177 DEFB106AQ8N104 65 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 LZTR1Q8N653 840 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 VPS50Q96JG6 964 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 ELOVL4Q9GZR5 314 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SCN3BQ9NY72 215 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 RAMP2O60895 175 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SERPINF2P08697 491 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 GHRP10912 638 aa16.37■□□□□ 0.21
USP42-201ENST00000306177 SCTRP47872 440 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms