RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 DCAF15Q66K64 600 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 PAOXQ6QHF9 649 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 NAPRTQ6XQN6 538 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 MARK2Q7KZI7 788 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 TTC39CQ8N584 583 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 TTC13Q8NBP0 860 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 MAPK15Q8TD08 544 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 DIS3LQ8TF46 1054 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 ACSF2Q96CM8 615 aaPredicted RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 OLFM3Q96PB7 478 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 TSSK1BQ9BXA7 367 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 C1QTNF1Q9BXJ1 281 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 OXCT2Q9BYC2 517 aaPredicted RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 RAVER2Q9HCJ3 691 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 TLR9Q9NR96 1032 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 GABBR1Q9UBS5 961 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 SIX4Q9UIU6 781 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 AGO2Q9UKV8 859 aaKnown RBP5.65□□□□□ -1.5
VPS50-202ENST00000305866 SARDHQ9UL12 918 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 PCDHGA4Q9Y5G9 962 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 COMMD3-BMI1R4GMX3 469 aa5.65□□□□□ -1.5
VPS50-202ENST00000305866 A0A0J9YVX5 310 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 G3V2L1 256 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 BIRC5O15392 142 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 RAD21O60216 631 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 SPAG6O75602 509 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TOM1L1O75674 476 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 PEX2P28328 305 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 RFC1P35251 1148 aaPredicted RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 OTUD4Q01804 1114 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 BAATQ14032 418 aaPredicted RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 XKR9Q5GH70 373 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 XKR4Q5GH76 650 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 MEX3CQ5U5Q3 659 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 CYP4F22Q6NT55 531 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TRMT10BQ6PF06 316 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 ARHGAP22Q7Z5H3 698 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TMEM126BQ8IUX1 230 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 MCUQ8NE86 351 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 GSTCDQ8NEC7 633 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 ZFP28Q8NHY6 868 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 FAM81AQ8TBF8 368 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 ZBTB45Q96K62 511 aaPredicted RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 CNDP1Q96KN2 507 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 SRPK1Q96SB4 655 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 SLC52A3Q9NQ40 469 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 RNF146Q9NTX7 359 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 ATXN10Q9UBB4 475 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 FBXO40Q9UH90 709 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 GJD2Q9UKL4 321 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 KIAA1257Q9ULG3 409 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 KCNH4Q9UQ05 1017 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TNFSF13BQ9Y275 285 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 CHADO15335 359 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 GMPRP36959 345 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 ELK3P41970 407 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 IDH3AP50213 366 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TNK2Q07912 1038 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 FSTL1Q12841 308 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 LAMB3Q13751 1172 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 NCOA4Q13772 614 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 MXD4Q14582 209 aaPredicted RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 TRMT5Q32P41 509 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 PIGGQ5H8A4 983 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TREML2Q5T2D2 321 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 ARHGEF16Q5VV41 709 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 LPCAT4Q643R3 524 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TRIM68Q6AZZ1 485 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 IZUMO2Q6UXV1 221 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 C3orf62Q6ZUJ4 267 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 DHDDSQ86SQ9 333 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 DHX37Q8IY37 1157 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 NIM1KQ8IY84 436 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 CPSF7Q8N684 471 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 ACTL9Q8TC94 416 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 TWNKQ96RR1 684 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 NIF3L1Q9GZT8 377 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 C2orf40Q9H1Z8 148 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 PREBQ9HCU5 417 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.65□□□□□ -1.51
VPS50-202ENST00000305866 HOXC10Q9NYD6 342 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 PLK2Q9NYY3 685 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 DNMT3BQ9UBC3 853 aaKnown RBP5.65□□□□□ -1.51
VPS50-202ENST00000305866 ITGA11Q9UKX5 1188 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 NR2E3Q9Y5X4 410 aa5.65□□□□□ -1.51
VPS50-202ENST00000305866 A0A0G2JLL6 359 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 BCLAF3A2AJT9 711 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 OGTO15294 1046 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 HAUS5O94927 633 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 WISP3O95389 354 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 TRUB2O95900 331 aaKnown RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 C6orf222P0C671 652 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 IMPDH2P12268 514 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 VCLP18206 1134 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 SSTR3P32745 418 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 HPCAP84074 193 aa5.64□□□□□ -1.51
VPS50-202ENST00000305866 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS50-202ENST00000305866 PDCD2Q16342 344 aaPredicted RBP5.64□□□□□ -1.51
VPS50-202ENST00000305866 FAM102BQ5T8I3 360 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms