RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 CYB5RLQ6IPT4 315 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CYS1Q717R9 158 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 NATD1Q8N6N6 113 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ZNF507Q8TCN5 953 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 IFT43Q96FT9 208 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CASS4Q9NQ75 786 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 KRT84Q9NSB2 600 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 MRPL39Q9NYK5 338 aaKnown RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 TFCP2L1Q9NZI6 479 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 C3orf18Q9UK00 162 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 DIP2BQ9P265 1576 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 HEATR9A2RTY3 570 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 USP27XA6NNY8 438 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 EPN2O95208 641 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CYP3A4P08684 503 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 AKAP5P24588 427 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 TYK2P29597 1187 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 GSTT1P30711 240 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ACTR2P61160 394 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ACAP2Q15057 778 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 DPP10Q8N608 796 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 SLC39A8Q9C0K1 460 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 FAM153AQ9UHL3 310 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 DOCK10Q96BY6 2186 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CHP2O43745 196 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CYP1A1P04798 512 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ASNSP08243 561 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 MYL2P10916 166 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 BMP3P12645 472 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CCNA2P20248 432 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 EIF4BP23588 611 aaKnown RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 GTF2E2P29084 291 aaKnown RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 TECP42680 631 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 PHKA2P46019 1235 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 GJA8P48165 433 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 HSD17B4P51659 736 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 PDIA2Q13087 525 aaKnown RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 VPS72Q15906 364 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 BBS9Q3SYG4 887 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 COQ5Q5HYK3 327 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ZNF746Q6NUN9 644 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 MZT2BQ6NZ67 158 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ULK3Q6PHR2 472 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ABRAXAS1Q6UWZ7 409 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CCNYQ8ND76 341 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 FAM45AQ8TCE6 357 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 VPS35Q96QK1 796 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 S100A13Q99584 98 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 RTKNQ9BST9 563 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ADI1Q9BV57 179 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
SCN1A-201ENST00000303395 KMT5AQ9NQR1 393 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 PRDM8Q9NQV8 689 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 EVA1BQ9NVM1 165 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 IGSF9Q9P2J2 1179 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 HPS5Q9UPZ3 1129 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 INPP5FQ9Y2H2 1132 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 ALG6Q9Y672 507 aa5.39□□□□□ -1.55
SCN1A-201ENST00000303395 N4BP2Q86UW6 1770 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 LRRC14BA6NHZ5 514 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 DNALI1O14645 258 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TRIM49P0CI25 452 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TRIM49CP0CI26 452 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 VCLP18206 1134 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 RAD51Q06609 339 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 PTK7Q13308 1070 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 CCDC157Q569K6 752 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 SLC10A5Q5PT55 438 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 HECTD3Q5T447 861 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 SLC30A8Q8IWU4 369 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 PLD6Q8N2A8 252 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 GPRASP2Q96D09 838 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 KLHL25Q9H0H3 589 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TMEM216Q9P0N5 145 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 NSFL1CQ9UNZ2 370 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 AAR2Q9Y312 384 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TNPO3Q9Y5L0 923 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 ZNF536O15090 1300 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 BCL9LQ86UU0 1499 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TRIM64A6NGJ6 449 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 APOC4-APOC2K7ER74 178 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 CFLARO15519 480 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 GUCY1B2O75343 617 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 APOC2P02655 101 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 PABPC4LP0CB38 370 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 MSR1P21757 451 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 FRG1Q14331 258 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 RRP1BQ14684 758 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 ZNF827Q17R98 1081 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 DUOXA2Q1HG44 320 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 PYHIN1Q6K0P9 492 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 PADI6Q6TGC4 694 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 MAEAQ7L5Y9 396 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 CHST3Q7LGC8 479 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 TDRD5Q8NAT2 981 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 ACOT12Q8WYK0 555 aa5.38□□□□□ -1.55
SCN1A-201ENST00000303395 NARS2Q96I59 477 aaKnown RBP5.38□□□□□ -1.55
SCN1A-201ENST00000303395 NIF3L1Q9GZT8 377 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms