RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.92□□□□□ -1.3
TMC1-201ENST00000297784 OSTM1Q86WC4 334 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 CASD1Q96PB1 797 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 GBP5Q96PP8 586 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 MCOLN1Q9GZU1 580 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 SUDS3Q9H7L9 328 aaPredicted RBP6.92□□□□□ -1.3
TMC1-201ENST00000297784 SAR1AQ9NR31 198 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 IL1RAPL1Q9NZN1 696 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TJP2Q9UDY2 1190 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 DNAJB4Q9UDY4 337 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 BLOC1S6Q9UL45 172 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 CHKBQ9Y259 395 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 COMMD3-BMI1R4GMX3 469 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TCRBV5S1A1TA0A578 114 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TLR3O15455 904 aaKnown RBP6.92□□□□□ -1.3
TMC1-201ENST00000297784 GABBR2O75899 941 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 PTPN4P29074 926 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TAF6P49848 677 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 AP1B1Q10567 949 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 RCN2Q14257 317 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TCEAL1Q15170 157 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 CYP1B1Q16678 543 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 PKDCCQ504Y2 493 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 TIGD5Q53EQ6 642 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
TMC1-201ENST00000297784 DENND1BQ6P3S1 775 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 DEFB128Q7Z7B8 93 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 VSIG1Q86XK7 387 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 COLGALT2Q8IYK4 626 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 MCOLN2Q8IZK6 566 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 RTP3Q9BQQ7 232 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 SLC38A7Q9NVC3 462 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 INPP5FQ9Y2H2 1132 aa6.92□□□□□ -1.3
TMC1-201ENST00000297784 I3L4J1 428 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 CYP1A2P05177 515 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 CLTBP09497 229 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 MYBL1P10243 752 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 STX2P32856 288 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 GPD2P43304 727 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SLCO1A2P46721 670 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SLC18A1P54219 525 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 HADHBP55084 474 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 CNPY1Q3B7I2 92 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PAN2Q504Q3 1202 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 C4orf50Q6ZRC1 276 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 ACOT1Q86TX2 421 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 CPNE8Q86YQ8 564 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TTC8Q8TAM2 541 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 RFFLQ8WZ73 363 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PPP1R14BQ96C90 147 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PGBD4Q96DM1 585 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 ERP27Q96DN0 273 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 LRRC37BQ96QE4 947 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SPATA16Q9BXB7 569 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 MIS12Q9H081 205 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 FAM124BQ9H5Z6 455 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 ELAC1Q9H777 363 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 UBN1Q9NPG3 1134 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TBC1D13Q9NVG8 400 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TMEM161AQ9NX61 479 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 PDGFRBP09619 1106 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 MMP8P22894 467 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 RRM1P23921 792 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 RPL9P32969 192 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 PNPLA4P41247 253 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 GPC5P78333 572 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SLC34A1Q06495 639 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 MPP2Q14168 576 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 UBAP2Q5T6F2 1119 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 ACBD5Q5T8D3 534 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 SNX30Q5VWJ9 437 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 WSCD1Q658N2 575 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PAQR9Q6ZVX9 377 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 C16orf59Q7L2K0 433 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TMCO2Q7Z6W1 182 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 PHF13Q86YI8 300 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 MGARPQ8TDB4 240 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 HASPINQ8TF76 798 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 SCG3Q8WXD2 468 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 BTBD6Q96KE9 485 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 HEXIM2Q96MH2 286 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 PITPNM3Q9BZ71 974 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 ZCWPW1Q9H0M4 648 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 LHX5Q9H2C1 402 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 MMADHCQ9H3L0 296 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 TMEM39AQ9NV64 488 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 ZNF212Q9UDV6 495 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 HAO1Q9UJM8 370 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 ZNF510Q9Y2H8 683 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 M0QZQ0 153 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 CYB561D2O14569 222 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 XPOTO43592 962 aaKnown RBP6.91□□□□□ -1.3
TMC1-201ENST00000297784 MICAL2O94851 1124 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 TIMP1P01033 207 aa6.91□□□□□ -1.3
TMC1-201ENST00000297784 CCDC166P0CW27 439 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms