RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MNAT1P51948 309 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 BCAT1P54687 386 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 XRCC4Q13426 336 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 PDK2Q15119 407 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 CXCL17Q6UXB2 119 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 LRRC6Q86X45 466 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 BANPQ8N9N5 519 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 GSTCDQ8NEC7 633 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 FAM111AQ96PZ2 611 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 TMEM237Q96Q45 408 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 GAD1Q99259 594 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 MECRQ9BV79 373 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 MYLK2Q9H1R3 596 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 ZNF395Q9H8N7 513 aaPredicted RBP12.21□□□□□ -0.45
RHO-201ENST00000296271 POPDC2Q9HBU9 364 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 NPHS2Q9NP85 383 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 DCTN4Q9UJW0 460 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 CHKBQ9Y259 395 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 DERAQ9Y315 318 aa12.21□□□□□ -0.45
RHO-201ENST00000296271 HAS3O00219 553 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 CYB561D2O14569 222 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 MDM4O15151 490 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 CREB3O43889 395 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 MFSD11O43934 449 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 CSH1P0DML2 217 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 CSH2P0DML3 217 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 GHRP10912 638 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 PHBP35232 272 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 PDCD11Q14690 1871 aaKnown RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 PDK4Q16654 411 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 UNC93AQ86WB7 457 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.21□□□□□ -0.46
RHO-201ENST00000296271 RFWD2Q8NHY2 731 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 HASPINQ8TF76 798 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 PRR11Q96HE9 360 aaPredicted RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 FRMD8P1Q9BZ68 369 aaPredicted RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 CRTAC1Q9NQ79 661 aa12.21□□□□□ -0.46
RHO-201ENST00000296271 ZC3H7BQ9UGR2 993 aaKnown RBP12.21□□□□□ -0.46
RHO-201ENST00000296271 SCN4AP35499 1836 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 TTC3P53804 2025 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 F8W810 466 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 HUS1O60921 280 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 DNAJC8O75937 253 aaPredicted RBP12.2□□□□□ -0.46
RHO-201ENST00000296271 TRIM32Q13049 653 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 STILQ15468 1287 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 DPYSL2Q16555 572 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CES4AQ5XG92 561 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CES3Q6UWW8 571 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 UNC5AQ6ZN44 842 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CEP128Q6ZU80 1094 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 DEPDC1BQ8WUY9 529 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 ZIC5Q96T25 663 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 ARHGAP39Q9C0H5 1083 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.2□□□□□ -0.46
RHO-201ENST00000296271 SEPT10Q9P0V9 454 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 PAK5Q9P286 719 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 KANSL3Q9P2N6 904 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 MAGED2Q9UNF1 606 aaPredicted RBP12.2□□□□□ -0.46
RHO-201ENST00000296271 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 TRIM49D1C9J1S8 452 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CHADO15335 359 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 EDF1O60869 148 aaKnown RBP12.2□□□□□ -0.46
RHO-201ENST00000296271 FYNP06241 537 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 KRT16P08779 473 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 TGM2P21980 687 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CLCNKBP51801 687 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 BNIP1Q12981 228 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
RHO-201ENST00000296271 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 SH2D5Q6ZV89 423 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 SLC44A1Q8WWI5 657 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 ERP27Q96DN0 273 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 CYTH2Q99418 400 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 MED10Q9BTT4 135 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 SLC13A1Q9BZW2 595 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 PIGVQ9NUD9 493 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 KLHL14Q9P2G3 628 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
RHO-201ENST00000296271 E2F8A0AVK6 867 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 BCLAF3A2AJT9 711 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 YJEFN3A6XGL0 299 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 E7ENQ6 273 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 M0QYT0 321 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 MT-ND3P03897 115 aa12.19□□□□□ -0.46
RHO-201ENST00000296271 PTPN1P18031 435 aaKnown RBP12.19□□□□□ -0.46
RHO-201ENST00000296271 TARSP26639 723 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms