RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 NDUFA10O95299 355 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 IGLV3-27P01718 113 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 H2AFZP0C0S5 128 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 PSMC3P17980 439 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 ABCB4P21439 1286 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 KPNA1P52294 538 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RING1Q06587 406 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 MAMLD1Q13495 774 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 MTF1Q14872 753 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 TRIP4Q15650 581 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 OTUD1Q5VV17 481 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RAD9BQ6WBX8 426 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 H2AFVQ71UI9 128 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 BNIPLQ7Z465 357 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 PHLDB2Q86SQ0 1253 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 TAC4Q86UU9 113 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 GJD3Q8N144 294 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 JOSD2Q8TAC2 188 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RSAD2Q8WXG1 361 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 PLD4Q96BZ4 506 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 PGAP3Q96FM1 320 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 EIF3CQ99613 913 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 RPP25Q9BUL9 199 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 PLA2G2FQ9BZM2 168 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 THAP2Q9H0W7 228 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 MRPL47Q9HD33 250 aaKnown RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 GKN1Q9NS71 199 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 TMEM51Q9NW97 253 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 INTUQ9ULD6 942 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 EPN1Q9Y6I3 576 aaPredicted RBP13.81□□□□□ -0.2
CCDC42-201ENST00000293845 TICRRQ7Z2Z1 1910 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 MYOFQ9NZM1 2061 aa13.81□□□□□ -0.2
CCDC42-201ENST00000293845 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 E2F8A0AVK6 867 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 MSI1O43347 362 aaKnown RBP13.8□□□□□ -0.2
CCDC42-201ENST00000293845 GREM1O60565 184 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 STC2O76061 302 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 GJB6O95452 261 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 CYP1A2P05177 515 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 ASGR2P07307 311 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 PTPN9P43378 593 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 GPC5P78333 572 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
CCDC42-201ENST00000293845 SLC25A52Q3SY17 297 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 LRRC8AQ8IWT6 810 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 EMC1Q8N766 993 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 ST13P5Q8NFI4 369 aaPredicted RBP13.8□□□□□ -0.2
CCDC42-201ENST00000293845 FNIP1Q8TF40 1166 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 RXFP2Q8WXD0 754 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 SLC39A13Q96H72 371 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 PACSIN1Q9BY11 444 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 CFAP97Q9P2B7 532 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 TLR6Q9Y2C9 796 aa13.8□□□□□ -0.2
CCDC42-201ENST00000293845 TTC28Q96AY4 2481 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 CHADO15335 359 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 GPD1P21695 349 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 SDC4P31431 198 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 SULT1E1P49888 294 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 TBX4P57082 545 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
CCDC42-201ENST00000293845 TDGQ13569 410 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 SPA17Q15506 151 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 NUGGCQ68CJ6 796 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 DCUN1D2Q6PH85 259 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 Q6ZNB5 142 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 HTR3DQ70Z44 454 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 RNF135Q8IUD6 432 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 ADAM32Q8TC27 787 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 CTNNBL1Q8WYA6 563 aaPredicted RBP13.79□□□□□ -0.2
CCDC42-201ENST00000293845 WBP2Q969T9 261 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 ARHGEF26Q96DR7 871 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 FCRL2Q96LA5 508 aaPredicted RBP13.79□□□□□ -0.2
CCDC42-201ENST00000293845 NECAB3Q96P71 396 aaPredicted RBP13.79□□□□□ -0.2
CCDC42-201ENST00000293845 ADAM33Q9BZ11 813 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 DCLK3Q9C098 648 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 CD320Q9NPF0 282 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
CCDC42-201ENST00000293845 SORCS3Q9UPU3 1222 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 SH3BP1Q9Y3L3 701 aa13.79□□□□□ -0.2
CCDC42-201ENST00000293845 COL4A3Q01955 1670 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 TMEM191CA6NGB0 347 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 M0QYT0 321 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 ARHGAP6O43182 974 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 ENDOD1O94919 500 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
CCDC42-201ENST00000293845 LATS1O95835 1130 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 F9P00740 461 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 PDGFRAP16234 1089 aa13.78□□□□□ -0.2
CCDC42-201ENST00000293845 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms