RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 TMEM35AQ53FP2 167 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 GARNL3Q5VVW2 1013 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 SYCE2Q6PIF2 218 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PSTKQ8IV42 348 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PTPRN2Q92932 1015 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 NUSAP1Q9BXS6 441 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 MRPL9Q9BYD2 267 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 WWP1Q9H0M0 922 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 POLR1BQ9H9Y6 1135 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 RABGEF1Q9UJ41 708 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CRLS1Q9UJA2 301 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ITGB1BP2Q9UKP3 347 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TNRQ92752 1358 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 UBE4BO95155 1302 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PCDH11XQ9BZA7 1347 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PCDH11YQ9BZA8 1340 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 E9PBE3 544 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TEX46H3BTG2 121 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 FKTNO75072 461 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 MED24O75448 989 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 GLSO94925 669 aaPredicted RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 GNA14O95837 355 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TCEA1P23193 301 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CDC25AP30304 524 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 DNASE1L1P49184 302 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 SLC11A2P49281 568 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 SCNN1DP51172 638 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TUBB4BP68371 445 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CDK17Q00537 523 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 LRRC24Q50LG9 513 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 EFHC2Q5JST6 749 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 LLGL2Q6P1M3 1020 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 RNF44Q7L0R7 432 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 EXOC3L1Q86VI1 746 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CCDC103Q8IW40 242 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CYP4Z2PQ8N1L4 340 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 E2F7Q96AV8 911 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 MYL10Q9BUA6 226 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ZNF717Q9BY31 904 aaPredicted RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 IL25Q9H293 177 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 NPHP3-ACAD11A0A0J9YXS1 232 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 RNF103-CHMP3A0A140T963 221 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 MGAT4DA6NG13 374 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ZBTB22O15209 634 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TRIM16O95361 564 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 DLGAP3O95886 979 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ME2P23368 584 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 MFAP3P55082 362 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CHRNB3Q05901 458 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PPIL2Q13356 520 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TTLL9Q3SXZ7 439 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 TFDP3Q5H9I0 405 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 SPANXN2Q5MJ10 180 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 VSTM1Q6UX27 236 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 OR10H5Q8NGA6 315 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 NDNFQ8TB73 568 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ZNF512BQ96KM6 892 aaPredicted RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 CEP170P1Q96L14 293 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 STRA6Q9BX79 667 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 NCOA5Q9HCD5 579 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 POLMQ9NP87 494 aaPredicted RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ADPRHL2Q9NX46 363 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 ADA2Q9NZK5 511 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 NDRG2Q9UN36 371 aaKnown RBP4.5□□□□□ -1.69
NCOA1-201ENST00000288599 PCDHA11Q9Y5I1 949 aa4.5□□□□□ -1.69
NCOA1-201ENST00000288599 URADA6NGE7 173 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 TLL1O43897 1013 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 OR10H2O60403 315 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SIN3BO75182 1162 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 ASS1P00966 412 aaKnown RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 PTPRAP18433 802 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 OXCT1P55809 520 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 FOXM1Q08050 763 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 ST3GAL4Q11206 333 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 KRT24Q2M2I5 525 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 KCNT1Q5JUK3 1230 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 ATAT1Q5SQI0 421 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 C1orf146Q5VVC0 180 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 CCSAPQ6IQ19 270 aaPredicted RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 RHOT2Q8IXI1 618 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 OR6P1Q8NGX9 317 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SMG7Q92540 1137 aaKnown RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 UPF1Q92900 1129 aaKnown RBP eCLIP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SIPA1Q96FS4 1042 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 POP1Q99575 1024 aaKnown RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 RANBP17Q9H2T7 1088 aaKnown RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 CLEC4MQ9H2X3 399 aaPredicted RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SLC38A7Q9NVC3 462 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 FKBP14Q9NWM8 211 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 OR10H1Q9Y4A9 318 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SOS1Q07889 1333 aaPredicted RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 SMIM31A0A1B0GVY4 71 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 NDUFS3O75489 264 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 TM7SF2O76062 418 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 MYBP10242 640 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 IFNAR1P17181 557 aa4.49□□□□□ -1.69
NCOA1-201ENST00000288599 ACAT1P24752 427 aaKnown RBP4.49□□□□□ -1.69
NCOA1-201ENST00000288599 DUSP3P51452 185 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms