RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ITPKAP23677 461 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CORO1AP31146 461 aaKnown RBP14.74□□□□□ -0.05
TPM1-202ENST00000288398 RDXP35241 583 aaKnown RBP14.74□□□□□ -0.05
TPM1-202ENST00000288398 SYCP2LQ5T4T6 812 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 RGL4Q8IZJ4 473 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 DEFB119Q8N690 84 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 FRMD1Q8N878 549 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 ERLEC1Q96DZ1 483 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 IPO9Q96P70 1041 aaKnown RBP14.74□□□□□ -0.05
TPM1-202ENST00000288398 GTPBP4Q9BZE4 634 aaKnown RBP14.74□□□□□ -0.05
TPM1-202ENST00000288398 LRRC4Q9HBW1 653 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CACNA2D2Q9NY47 1150 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 MARCH2Q9P0N8 246 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 SLC6A14Q9UN76 642 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CYP8B1Q9UNU6 501 aa14.74□□□□□ -0.05
TPM1-202ENST00000288398 CHD8Q9HCK8 2581 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SLC12A8A0AV02 714 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 PRRT4C9JH25 899 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 NPC1O15118 1278 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SYNCRIPO60506 623 aaKnown RBP14.73□□□□□ -0.05
TPM1-202ENST00000288398 GREM1O60565 184 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 KRT37O76014 449 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SYPP08247 313 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 CD19P15391 556 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 GNSP15586 552 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 NDUFV2P19404 249 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 YWHAGP61981 247 aaKnown RBP eCLIP14.73□□□□□ -0.05
TPM1-202ENST00000288398 ZNF33AQ06730 810 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 STIM1Q13586 685 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SLC23A3Q6PIS1 610 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 Q6ZNB5 142 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SCD5Q86SK9 330 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 SMYD4Q8IYR2 804 aaPredicted RBP14.73□□□□□ -0.05
TPM1-202ENST00000288398 ABCA7Q8IZY2 2146 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 ZNF276Q8N554 614 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 RNF139Q8WU17 664 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 EEF2KMTQ96G04 330 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 ACOX2Q99424 681 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 UBXN6Q9BZV1 441 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 GOLPH3LQ9H4A5 285 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
TPM1-202ENST00000288398 SUSD2Q9UGT4 822 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 PILRBQ9UKJ0 227 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 RAD54BQ9Y620 910 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 USP3Q9Y6I4 520 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 MYOFQ9NZM1 2061 aa14.73□□□□□ -0.05
TPM1-202ENST00000288398 NUP205Q92621 2012 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 IGHV1OR15-9A0A0B4J2B8 117 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 A0A1W2PQF6 199 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 CDX4O14627 284 aaPredicted RBP14.72□□□□□ -0.05
TPM1-202ENST00000288398 GIPC1O14908 333 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 SLC16A3O15427 465 aaKnown RBP14.72□□□□□ -0.05
TPM1-202ENST00000288398 OPHN1O60890 802 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 CHRM1P11229 460 aaPredicted RBP14.72□□□□□ -0.05
TPM1-202ENST00000288398 HARS2P49590 506 aaKnown RBP14.72□□□□□ -0.05
TPM1-202ENST00000288398 TKTL1P51854 596 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 BCAT1P54687 386 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 FKBP3Q00688 224 aaKnown RBP14.72□□□□□ -0.05
TPM1-202ENST00000288398 PNOCQ13519 176 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 GOLGA7BQ2TAP0 167 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 ZCWPW2Q504Y3 356 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 SGO2Q562F6 1265 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 WDR45BQ5MNZ6 344 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 ARHGAP17Q68EM7 881 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 ANKS1BQ7Z6G8 1248 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 PIGZQ86VD9 579 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 DENND1CQ8IV53 801 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 SIX6OS1Q8N1H7 587 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 ANKRD52Q8NB46 1076 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 SLC4A11Q8NBS3 891 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 DEFB124Q8NES8 71 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 DDI1Q8WTU0 396 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 SEMA4DQ92854 862 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 FOXJ1Q92949 421 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 HSPA12BQ96MM6 686 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 GABRG3Q99928 467 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 TMEM74BQ9NUR3 256 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 ZDHHC9Q9Y397 364 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 STON1Q9Y6Q2 735 aa14.72□□□□□ -0.05
TPM1-202ENST00000288398 MEI4A8MW99 385 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 ZBED1O96006 694 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 SERPINF2P08697 491 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 ACADMP11310 421 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 TBXAS1P24557 533 aaPredicted RBP14.71□□□□□ -0.05
TPM1-202ENST00000288398 ZNF132P52740 706 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 RAD23BP54727 409 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 CUL2Q13617 745 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 ZNF658Q5TYW1 1059 aaPredicted RBP14.71□□□□□ -0.05
TPM1-202ENST00000288398 KIAA1211LQ6NV74 962 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 TRIML1Q8N9V2 468 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 SMARCE1Q969G3 411 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 PLD4Q96BZ4 506 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 GSDMAQ96QA5 445 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 ARID3AQ99856 593 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 CIPCQ9C0C6 399 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 PRDM16Q9HAZ2 1276 aa14.71□□□□□ -0.05
TPM1-202ENST00000288398 ARMCX3Q9UH62 379 aaPredicted RBP14.71□□□□□ -0.05
TPM1-202ENST00000288398 AGO1Q9UL18 857 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms