RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 TFDP3Q5H9I0 405 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 SLC7A6OSQ96CW6 309 aaPredicted RBP13.36□□□□□ -0.27
ZIC3-201ENST00000287538 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 LRRC4Q9HBW1 653 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 COL1A2P08123 1366 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 TTC36A6NLP5 189 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 NDUFV1P49821 464 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 ARPP19P56211 112 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 RCN1Q15293 331 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 BBS9Q3SYG4 887 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 DTNBP1Q96EV8 351 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 NDNQ99608 321 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 AGO3Q9H9G7 860 aaKnown RBP13.36□□□□□ -0.27
ZIC3-201ENST00000287538 CYP3A43Q9HB55 503 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 SEPT10Q9P0V9 454 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 CNTN6Q9UQ52 1028 aa13.36□□□□□ -0.27
ZIC3-201ENST00000287538 MYO18AQ92614 2054 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 CSPG5O95196 566 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 UBTFL6P0CB48 400 aaPredicted RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RBP3P10745 1247 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 GAD2Q05329 585 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 CACNB2Q08289 660 aaPredicted RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RFWD3Q6PCD5 774 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 KATNAL2Q8IYT4 538 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 UBR7Q8N806 425 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 NFKBIZQ9BYH8 718 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 USH1CQ9Y6N9 552 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RASSF2P50749 326 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 CLCNKBP51801 687 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 ZBED8Q8IZ13 594 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RAET1EQ8TD07 263 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 ART4Q93070 314 aa13.35□□□□□ -0.27
ZIC3-201ENST00000287538 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 DDX50Q9BQ39 737 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 PIH1D1Q9NWS0 290 aaKnown RBP13.35□□□□□ -0.27
ZIC3-201ENST00000287538 KRT7P08729 469 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 T-ENOLP0DO92 83 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 BRCC3P46736 316 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 IL9RQ01113 521 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 ADIGQ0VDE8 80 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 LRRC19Q9H756 370 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 NUDT5Q9UKK9 219 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 PRG3Q9Y2Y8 225 aaPredicted RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 NME7Q9Y5B8 376 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 CRYBB1P53674 252 aaPredicted RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 GDF10P55107 478 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 RNF34Q969K3 372 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 ADAM2Q99965 735 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 MIOSQ9NXC5 875 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 PHTF1Q9UMS5 762 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 MAGEA13PA6NCF6 341 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 XPOTO43592 962 aaKnown RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 HMGCRP04035 888 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 DESP17661 470 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 KDELR1P24390 212 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 LILRA4P59901 499 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 ZRSR2Q15696 482 aaKnown RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 CA9Q16790 459 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 NRG4Q8WWG1 115 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 EDEM1Q92611 657 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 SLCO1B3Q9NPD5 702 aa13.34□□□□□ -0.27
ZIC3-201ENST00000287538 DDX43Q9NXZ2 648 aaKnown RBP13.34□□□□□ -0.27
ZIC3-201ENST00000287538 PRRC2BQ5JSZ5 2229 aaKnown RBP13.33□□□□□ -0.27
ZIC3-201ENST00000287538 F8W810 466 aa13.33□□□□□ -0.27
ZIC3-201ENST00000287538 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.27
ZIC3-201ENST00000287538 DUSP11O75319 330 aaKnown RBP13.33□□□□□ -0.27
ZIC3-201ENST00000287538 DCTN3O75935 186 aa13.33□□□□□ -0.27
ZIC3-201ENST00000287538 KRT36O76013 467 aa13.33□□□□□ -0.27
ZIC3-201ENST00000287538 SLC10A3P09131 477 aa13.33□□□□□ -0.27
ZIC3-201ENST00000287538 ZCCHC18P0CG32 403 aa13.33□□□□□ -0.27
ZIC3-201ENST00000287538 POU5F1BQ06416 359 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms