RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 NT5DC4Q86YG4 428 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TMEM199Q8N511 208 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CCDC185Q8N715 623 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CCT6BQ92526 530 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 PCDHB5Q9Y5E4 795 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 C5orf42Q9H799 3197 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CTIFO43310 598 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TRUB2O95900 331 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 AMHP03971 560 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CYP1A1P04798 512 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CHRNA3P32297 505 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 ITGA8P53708 1063 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 MAGOHP61326 146 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 ROR1Q01973 937 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TAF10Q12962 218 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 PDIA2Q13087 525 aaKnown RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TPGS1Q6ZTW0 290 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 CENPUQ71F23 418 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 C16orf59Q7L2K0 433 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRTM3Q86VH5 581 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 PRELID2Q8N945 189 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 RAB3IL1Q8TBN0 382 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 LGMNQ99538 433 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 KLF6Q99612 283 aaPredicted RBP9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 DUSP16Q9BY84 665 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
CCDC144B-201ENST00000285176 SIGLEC16A6NMB1 481 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 B4GALT3O60512 393 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PHF2O75151 1096 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 MT-ND3P03897 115 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 LRRC26Q2I0M4 334 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 CCDC197Q8NCU1 140 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 CCHCR1Q8TD31 782 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 KBTBD7Q8WVZ9 684 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 FTHL17Q9BXU8 183 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 SMYD2Q9NRG4 433 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PCDHA3Q9Y5H8 950 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 A0A1W2PQH9 124 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 SUN1O94901 812 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 APOEP02649 317 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 CRADDP78560 199 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 ACCSLQ4AC99 568 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PHF13Q86YI8 300 aaPredicted RBP9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 TTPALQ9BTX7 342 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 CHMP2BQ9UQN3 213 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 MFHAS1Q9Y4C4 1052 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PIRO00625 290 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 TFDP2Q14188 446 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 ZNF268Q14587 947 aaPredicted RBP9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 UPP1Q16831 310 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 RTP2Q5QGT7 225 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 CCNI2Q6ZMN8 369 aaPredicted RBP9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 LINC01465Q8N7H1 131 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 TTC8Q8TAM2 541 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 FAM136AQ96C01 138 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 HES6Q96HZ4 224 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 SCYL1Q96KG9 808 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 TACO1Q9BSH4 297 aaKnown RBP9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 GMIPQ9P107 970 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 PCDHB12Q9Y5F1 795 aa9.36□□□□□ -0.91
CCDC144B-201ENST00000285176 A0A0A6YYK5 440 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CIB2O75838 187 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 LCA5LO95447 670 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SETSIPP0DME0 302 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FECHP22830 423 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ACADSBP45954 432 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PMS2P54278 862 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 LONRF1Q17RB8 773 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 NUGGCQ68CJ6 796 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 DPY19L2P1Q6NXN4 242 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CES3Q6UWW8 571 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 UNC93AQ86WB7 457 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 NPAS4Q8IUM7 802 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SRRM1Q8IYB3 904 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PPP1R10Q96QC0 940 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 CORO1BQ9BR76 489 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 TMEM161AQ9NX61 479 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 SLC12A6Q9UHW9 1150 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 DDX3YO15523 660 aaKnown RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PMPCBO75439 489 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 MBL2P11226 248 aaPredicted RBP9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 GBE1Q04446 702 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 IL31Q6EBC2 164 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 FAM126BQ8IXS8 530 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 ATL2Q8NHH9 583 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
CCDC144B-201ENST00000285176 PPP4R1Q8TF05 950 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms