RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SNRPAP09012 282 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 CCDC166P0CW27 439 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 EDNRBP24530 442 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 MIPP30301 263 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 RGS2P41220 211 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FAAP100Q0VG06 881 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 PDK2Q15119 407 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 KBTBD12Q3ZCT8 623 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ACBD5Q5T8D3 534 aaPredicted RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 KYAT3Q6YP21 454 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 ARCQ7LC44 396 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 RASSF3Q86WH2 238 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 RFX6Q8HWS3 928 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FAM71DQ8N9W8 422 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 KCTD6Q8NC69 237 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 CNPY3Q9BT09 278 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SDCBP2Q9H190 292 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 POPDC2Q9HBU9 364 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ALG13Q9NP73 1137 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 ETNK2Q9NVF9 386 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SLC7A8Q9UHI5 535 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 TAGLN3Q9UI15 199 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 USP18Q9UMW8 372 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 A6NJR5 290 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ERBB2P04626 1255 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ENO1P06733 434 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 ITGA2BP08514 1039 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 HARSP12081 509 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 CNTFP26441 200 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ATICP31939 592 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SCNN1BP51168 640 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 RPL26P61254 145 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 YWHAZP63104 245 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 DCAF15Q66K64 600 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SCARA3Q6AZY7 606 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 MPZL3Q6UWV2 235 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 CATSPERGQ6ZRH7 1159 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 TTC39CQ8N584 583 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SPATA18Q8TC71 538 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 ANKRD36BP1Q96IX9 119 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SRPK1Q96SB4 655 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 WWP1Q9H0M0 922 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 PTTG2Q9NZH5 202 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 PPM1HQ9ULR3 514 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 CHMP2BQ9UQN3 213 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 PAPPA2Q9BXP8 1791 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 GOLGA8RI6L899 631 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FARP2O94887 1054 aaPredicted RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 STAU1O95793 577 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 CD48P09326 243 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 UQCRBP14927 111 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 DESP17661 470 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 SERPINB9P50453 376 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 INHBCP55103 352 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 HTRA3P83110 453 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FAM172AQ8WUF8 416 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FAF2Q96CS3 445 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 FAM111AQ96PZ2 611 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 CPXM1Q96SM3 734 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 THTPAQ9BU02 230 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 NFKBIZQ9BYH8 718 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 C12orf65Q9H3J6 166 aaKnown RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 SAE1Q9UBE0 346 aaPredicted RBP10.74□□□□□ -0.69
SKA1-201ENST00000285116 PLXNA1Q9UIW2 1896 aa10.74□□□□□ -0.69
SKA1-201ENST00000285116 PTPRFP10586 1907 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 BRCA1P38398 1863 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 RALGAPA2Q2PPJ7 1873 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 FAM237BA0A1B0GVD1 139 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 COPEO14579 308 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 PFDN1O60925 122 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 USP1O94782 785 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 TGFB3P10600 412 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 BGNP21810 368 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 CRHR1P34998 444 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 DYNLT1P63172 113 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.73□□□□□ -0.69
SKA1-201ENST00000285116 MAP3K21Q5TCX8 1036 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 SLC9A4Q6AI14 798 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 RAPH1Q70E73 1250 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 DHDDSQ86SQ9 333 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 TREML1Q86YW5 311 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 ZBTB8OSQ8IWT0 167 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
SKA1-201ENST00000285116 MPP4Q96JB8 637 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 TBCBQ99426 244 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 S100A14Q9HCY8 104 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 KIAA1257Q9ULG3 409 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 C2orf71A6NGG8 1288 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 FAM159BA6NKW6 160 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 BTBD19C9JJ37 291 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 I3L4J1 428 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 RFPL1O75677 317 aa10.73□□□□□ -0.69
SKA1-201ENST00000285116 PRKCBP05771 671 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms