RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MAB21L3Q8N8X9 362 aa22.74■■□□□ 1.23
PDLIM3-203ENST00000284771 PGAP3Q96FM1 320 aaPredicted RBP22.74■■□□□ 1.23
PDLIM3-203ENST00000284771 CALR3Q96L12 384 aaKnown RBP22.74■■□□□ 1.23
PDLIM3-203ENST00000284771 WDR6Q9NNW5 1121 aaKnown RBP22.74■■□□□ 1.23
PDLIM3-203ENST00000284771 USTQ9Y2C2 406 aa22.74■■□□□ 1.23
PDLIM3-203ENST00000284771 SYNJ2BP-COX16A0A087WUM0 186 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 ATP5C1P36542 298 aaKnown RBP22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 TAS2R40P59535 323 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 ZXDBP98169 803 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 NME3Q13232 169 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 IFI16Q16666 785 aaKnown RBP22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 ZNF569Q5MCW4 686 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 CC2D1AQ6P1N0 951 aaPredicted RBP22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 KLHDC10Q6PID8 442 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 NYAP1Q6ZVC0 841 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 STRADAQ7RTN6 431 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 ARL14EPQ8N8R7 260 aaPredicted RBP22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 MRPS31Q92665 395 aaKnown RBP22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 TRPC7Q9HCX4 862 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 COX16Q9P0S2 106 aa22.73■■□□□ 1.23
PDLIM3-203ENST00000284771 FTCDO95954 541 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 MAN1A1P33908 653 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 ITIH3Q06033 890 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 CBX2Q14781 532 aaPredicted RBP22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 ACAP1Q15027 740 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 TXNRD3NBQ6F5E7 133 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 CYP4V2Q6ZWL3 525 aaPredicted RBP22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 NT5DC3Q86UY8 548 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 MIB1Q86YT6 1006 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 TRIM58Q8NG06 486 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 ING5Q8WYH8 240 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 ZSWIM3Q96MP5 696 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 WDR24Q96S15 920 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 ANLNQ9NQW6 1124 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 OLA1Q9NTK5 396 aaKnown RBP22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 DDIT4Q9NX09 232 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 RRN3Q9NYV6 651 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 MARCH2Q9P0N8 246 aa22.72■■□□□ 1.23
PDLIM3-203ENST00000284771 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 I6L893 689 aaPredicted RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 IRAK2O43187 625 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 FGF19O95750 216 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 CEBPBP17676 345 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 HDCP19113 662 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 IL1R2P27930 398 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 MIPP30301 263 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 CLUL1Q15846 466 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 SLC35F6Q8N357 371 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 PPM1EQ8WY54 764 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 CD101Q93033 1021 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 ZFRQ96KR1 1074 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 PEBP4Q96S96 227 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 DNMT3LQ9UJW3 386 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 PACSIN2Q9UNF0 486 aaPredicted RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 MRPS23Q9Y3D9 190 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 ZNF197O14709 1029 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 KIF5CO60282 957 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 RNF8O76064 485 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 MSNP26038 577 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 DEUP1Q05D60 604 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 GPR158Q5T848 1215 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 FAM131BQ86XD5 332 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 SMRP1Q8NCR6 262 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 GCNAQ96QF7 691 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 CDK5RAP1Q96SZ6 601 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 FAM204AQ9H8W3 233 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 GKN1Q9NS71 199 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 RASAL2Q9UJF2 1139 aa22.71■■□□□ 1.23
PDLIM3-203ENST00000284771 ESPNB1AK53 854 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 H3BQ06 376 aaPredicted RBP22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 RDXP35241 583 aaKnown RBP22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 PCK1P35558 622 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 SLC1A1P43005 524 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 CXCR3P49682 368 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 SLC25A11Q02978 314 aaKnown RBP22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 ATAT1Q5SQI0 421 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 SLC39A13Q96H72 371 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 C16orf45Q96MC5 204 aaPredicted RBP22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 MAGEB5Q9BZ81 275 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 TMPRSS4Q9NRS4 437 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 PCSK1NQ9UHG2 260 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 LCMT1Q9UIC8 334 aa22.7■■□□□ 1.22
PDLIM3-203ENST00000284771 COL6A3P12111 3177 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 GNG11P61952 73 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 ATP13A4Q4VNC1 1196 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 CES5AQ6NT32 575 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 SYCE1Q8N0S2 351 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 WBP2Q969T9 261 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 SERPINB11Q96P15 392 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 ALS2CR12Q96Q35 445 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 KLF16Q9BXK1 252 aaPredicted RBP22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 TASP1Q9H6P5 420 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 USP18Q9UMW8 372 aa22.69■■□□□ 1.22
PDLIM3-203ENST00000284771 CLUHO75153 1309 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 DOCK8Q8NF50 2099 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 SLC12A8A0AV02 714 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 SPOPO43791 374 aa22.68■■□□□ 1.22
PDLIM3-203ENST00000284771 F9P00740 461 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms