RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD44-204ENST00000279452 BBS2Q9BXC9 721 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 DCLK3Q9C098 648 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 TRPV5Q9NQA5 729 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 METTL5Q9NRN9 209 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 SPATA6Q9NWH7 488 aaPredicted RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 DDIT4Q9NX09 232 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 STAP1Q9ULZ2 295 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 HBS1LQ9Y450 684 aaKnown RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 MTF2Q9Y483 593 aaPredicted RBP6.82□□□□□ -1.32
CD44-204ENST00000279452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.82□□□□□ -1.32
CD44-204ENST00000279452 NOTCH4Q99466 2003 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 PRUNE2Q8WUY3 3088 aa6.82□□□□□ -1.32
CD44-204ENST00000279452 OBSL1O75147 1896 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 TYW5A2RUC4 315 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 OTOL1A6NHN0 477 aaPredicted RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 TRDMT1O14717 391 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 PI15O43692 258 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 TSPAN3O60637 253 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 DAB1O75553 588 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SKILP12757 684 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 GLULP15104 373 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CHRNB2P17787 502 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 AVPR2P30518 371 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CASP14P31944 242 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 GBP1P32455 592 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 GJA4P35212 333 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CHKAP35790 457 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SLC11A2P49281 568 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CLCN5P51795 746 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SEC13P55735 322 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SLC6A3Q01959 620 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 GAD2Q05329 585 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 TRIP4Q15650 581 aaPredicted RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 TSR1Q2NL82 804 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 NUGGCQ68CJ6 796 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 NAIF1Q69YI7 327 aaPredicted RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 SPECC1LQ69YQ0 1117 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 MSANTD2Q6P1R3 559 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 TXNDC11Q6PKC3 985 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 OLFML1Q6UWY5 402 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 HTR3DQ70Z44 454 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SND1Q7KZF4 910 aaKnown RBP eCLIP6.81□□□□□ -1.32
CD44-204ENST00000279452 BMP8AQ7Z5Y6 402 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 VPS36Q86VN1 386 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 XYLT1Q86Y38 959 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 ZDHHC17Q8IUH5 632 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 UNC45BQ8IWX7 931 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CCDC105Q8IYK2 499 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 DDI1Q8WTU0 396 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CD101Q93033 1021 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 IQCDQ96DY2 449 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 CHFRQ96EP1 664 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 XPO6Q96QU8 1125 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 NELL2Q99435 816 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 ANP32EQ9BTT0 268 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SELENOOQ9BVL4 669 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 RBSNQ9H1K0 784 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 DEF6Q9H4E7 631 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 HAUS4Q9H6D7 363 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 LMAN1LQ9HAT1 526 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 SPHK2Q9NRA0 654 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 RBM12Q9NTZ6 932 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 DNAJC17Q9NVM6 304 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 ZNHIT6Q9NWK9 470 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 PLK2Q9NYY3 685 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 ADAM22Q9P0K1 906 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 AGO1Q9UL18 857 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 MYO6Q9UM54 1294 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 ZNF510Q9Y2H8 683 aa6.81□□□□□ -1.32
CD44-204ENST00000279452 LUC7L2Q9Y383 392 aaKnown RBP6.81□□□□□ -1.32
CD44-204ENST00000279452 ITIH6Q6UXX5 1313 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TICRRQ7Z2Z1 1910 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 A0A1W2PQJ5 194 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 M0QYT0 321 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 IRAK2O43187 625 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 LAMTOR5O43504 91 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 GJB6O95452 261 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TRUB2O95900 331 aaKnown RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 EGFP01133 1207 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CYP1A1P04798 512 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 GYPCP04921 128 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 APODP05090 189 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CALB1P05937 261 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 GLI1P08151 1106 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 TYRP14679 529 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 DESP17661 470 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 COL9A1P20849 921 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ABCB4P21439 1286 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 CDH5P33151 784 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 PBX1P40424 430 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 RPL34P49207 117 aaKnown RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 GALK1P51570 392 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 PITX1P78337 314 aaPredicted RBP6.8□□□□□ -1.32
CD44-204ENST00000279452 ZBED6P86452 979 aa6.8□□□□□ -1.32
CD44-204ENST00000279452 ATP11AP98196 1134 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms