RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 CPA1P15085 419 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 RPL13P26373 211 aaKnown RBP6.66□□□□□ -1.34
LIN7C-201ENST00000278193 RAB3GAP1Q15042 981 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 PFKFB3Q16875 520 aaPredicted RBP6.66□□□□□ -1.34
LIN7C-201ENST00000278193 PKDCCQ504Y2 493 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 ATL3Q6DD88 541 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 ZNF598Q86UK7 904 aaKnown RBP6.66□□□□□ -1.34
LIN7C-201ENST00000278193 NUDT13Q86X67 352 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 LPCAT1Q8NF37 534 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 SCFD1Q8WVM8 642 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 RHOVQ96L33 236 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 CNPY3Q9BT09 278 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 BTBD2Q9BX70 525 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 DCTPP1Q9H773 170 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 LRRC40Q9H9A6 602 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 CD300AQ9UGN4 299 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
LIN7C-201ENST00000278193 PCDHA11Q9Y5I1 949 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 CLCA3PQ9Y6N3 262 aa6.66□□□□□ -1.34
LIN7C-201ENST00000278193 PIP5K1BO14986 540 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SGPL1O95470 568 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 PGM1P36871 562 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 PIP4K2AP48426 406 aaPredicted RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 HSPA13P48723 471 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 HERVK_113P62684 666 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ERVK-24P63145 666 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SCRN3Q0VDG4 424 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ZNF124Q15973 351 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 FUT11Q495W5 492 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 KCNT1Q5JUK3 1230 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 RABEPKQ7Z6M1 372 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ZNF227Q86WZ6 799 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CNGA4Q8IV77 575 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CMIPQ8IY22 773 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 FAM133AQ8N9E0 248 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SLC5A5Q92911 643 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 NSUN4Q96CB9 384 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CEP19Q96LK0 163 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 IMPG2Q9BZV3 1241 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CENPMQ9NSP4 180 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 GDAP2Q9NXN4 497 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 PPIEQ9UNP9 301 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CFL2Q9Y281 166 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 PCDHA9Q9Y5H5 950 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 MADDQ8WXG6 1647 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 URADA6NGE7 173 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 A8MXQ7 604 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 O00370 1275 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 NOP56O00567 594 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SH2B2O14492 632 aaPredicted RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 PAPLNO95428 1278 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CAPN1P07384 714 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 KRT3P12035 628 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 BPIP17213 487 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CCR1P32246 355 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ACSL1P33121 698 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 MTTPP55157 894 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 DLG4P78352 724 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 DYNC1I2Q13409 638 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CUL3Q13618 768 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 TAZQ16635 292 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 DEPDC1Q5TB30 811 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 ZC3H7AQ8IWR0 971 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SYT2Q8N9I0 419 aaPredicted RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 EDC3Q96F86 508 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 AIFM2Q9BRQ8 373 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 KLHL25Q9H0H3 589 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 RAD21L1Q9H4I0 556 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 EXOC6BQ9Y2D4 811 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 KIAA0232Q92628 1395 aa6.65□□□□□ -1.34
LIN7C-201ENST00000278193 CLTCQ00610 1675 aaKnown RBP6.65□□□□□ -1.34
LIN7C-201ENST00000278193 SLC9B1P1A6NJY1 282 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 F5H0A9 414 aaPredicted RBP6.65□□□□□ -1.35
LIN7C-201ENST00000278193 PODXLO00592 558 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 B3GALT2O43825 422 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 CLEC3BP05452 202 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 IFNAR1P17181 557 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 CCNA2P20248 432 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 NMT1P30419 496 aaKnown RBP6.65□□□□□ -1.35
LIN7C-201ENST00000278193 RPIAP49247 311 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 ADARP55265 1226 aaKnown RBP6.65□□□□□ -1.35
LIN7C-201ENST00000278193 CYP4F3Q08477 520 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 NIPAL4Q0D2K0 466 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 GLRA4Q5JXX5 417 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 GALNT18Q6P9A2 607 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 B3GNT9Q6UX72 402 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 OTOAQ7RTW8 1153 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 EFL1Q7Z2Z2 1120 aaKnown RBP6.65□□□□□ -1.35
LIN7C-201ENST00000278193 TXNRD3Q86VQ6 643 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 HERVK_113Q902F9 699 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 C19orf60Q96EN9 201 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 PPP1R10Q96QC0 940 aaKnown RBP6.65□□□□□ -1.35
LIN7C-201ENST00000278193 RHBGQ9H310 441 aa6.65□□□□□ -1.35
LIN7C-201ENST00000278193 SUV39H2Q9H5I1 410 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms