RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 DAOAP59103 153 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 MRPS21P82921 87 aaKnown RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 LMNB2Q03252 620 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 PUM1Q14671 1186 aaKnown RBP eCLIP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 CRY1Q16526 586 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 PLK5Q496M5 336 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 MIIPQ5JXC2 388 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 BTBD8Q5XKL5 378 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 GBP6Q6ZN66 633 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 PRR23CQ6ZRP0 262 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 ERMP1Q7Z2K6 904 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 CACNA2D4Q7Z3S7 1137 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 SCML4Q8N228 414 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 TSTD1Q8NFU3 115 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 EDEM1Q92611 657 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 ZC3H10Q96K80 434 aaKnown RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 DUSP15Q9H1R2 295 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-201ENST00000275036 ARRDC1-AS1Q9H2J1 176 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 SMOC1Q9H4F8 434 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 SIX2Q9NPC8 291 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 RXFP3Q9NSD7 469 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 MARK1Q9P0L2 795 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 MARCH2Q9P0N8 246 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
HMGN3-201ENST00000275036 SLC12A8A0AV02 714 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 GTPBP10A4D1E9 387 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 NEDD8-MDP1E9PL57 170 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 CACNG3O60359 315 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 LRP3O75074 770 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 TYRP14679 529 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 BCKDHBP21953 392 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 GPD2P43304 727 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 DGKEP52429 567 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 ATXN1P54253 815 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 COG7P83436 770 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 STILQ15468 1287 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 CSRP2Q16527 193 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 TPD52L1Q16890 204 aaPredicted RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 EXOC3L4Q17RC7 722 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 BSPRYQ5W0U4 402 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 ANO7Q6IWH7 933 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 DPY19L2P1Q6NXN4 242 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 DENND1BQ6P3S1 775 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 RBM43Q6ZSC3 357 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 TOGARAM2Q6ZUX3 1019 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 RSRC2Q7L4I2 434 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 SIX6OS1Q8N1H7 587 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 TERB1Q8NA31 727 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 BBS2Q9BXC9 721 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 PLK2Q9NYY3 685 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 SFMBT1Q9UHJ3 866 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
HMGN3-201ENST00000275036 AGO1Q9UL18 857 aaKnown RBP15.1■□□□□ 0.01
HMGN3-201ENST00000275036 PLXND1Q9Y4D7 1925 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 NCOR2Q9Y618 2525 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
HMGN3-201ENST00000275036 LETM1O95202 739 aaPredicted RBP15.09■□□□□ 0.01
HMGN3-201ENST00000275036 TNFRSF4P43489 277 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 RPL34P49207 117 aaKnown RBP15.09■□□□□ 0.01
HMGN3-201ENST00000275036 MFAP3P55082 362 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 SF3A2Q15428 464 aaKnown RBP15.09■□□□□ 0.01
HMGN3-201ENST00000275036 ARHGAP44Q17R89 818 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 PLA2G2CQ5R387 149 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 C10orf76Q5T2E6 689 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 DENND1CQ8IV53 801 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 ZNF606Q8WXB4 792 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 BHMTQ93088 406 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 HSFY1Q96LI6 401 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 GBP4Q96PP9 640 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 DNAJC17Q9NVM6 304 aaKnown RBP15.09■□□□□ 0.01
HMGN3-201ENST00000275036 DEC1Q9P2X7 70 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 CEP192Q8TEP8 1941 aa15.09■□□□□ 0.01
HMGN3-201ENST00000275036 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 PRR5-ARHGAP8B1AHC4 643 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 PRRT4C9JH25 899 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 MSI1O43347 362 aaKnown RBP15.08■□□□□ 0
HMGN3-201ENST00000275036 CISD3P0C7P0 127 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 GNA15P30679 374 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 ARHGAP8P85298 464 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 TRIP4Q15650 581 aaPredicted RBP15.08■□□□□ 0
HMGN3-201ENST00000275036 FYB2Q5VWT5 728 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 EGFLAMQ63HQ2 1017 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 GRAMD4Q6IC98 578 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 CCDC26Q8TAB7 109 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 IRGQQ8WZA9 623 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 SHC3Q92529 594 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 LOXL4Q96JB6 756 aa15.08■□□□□ 0
HMGN3-201ENST00000275036 ACOX2Q99424 681 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms