RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SLC35B4Q969S0 331 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 MRPS26Q9BYN8 205 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 ZNF358Q9NW07 568 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 ZC3H7BQ9UGR2 993 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 FIS1Q9Y3D6 152 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 GIPC1O14908 333 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 ZFXP17010 805 aaPredicted RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 PSMC3P17980 439 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 MX2P20592 715 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
HERC6-202ENST00000273960 FSTL1Q12841 308 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 AAGABQ6PD74 315 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 NETO2Q8NC67 525 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 FEZF2Q8TBJ5 459 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 CDC14AQ9UNH5 594 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 COQ6Q9Y2Z9 468 aa13.25□□□□□ -0.29
HERC6-202ENST00000273960 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 ZBTB11O95625 1053 aaPredicted RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 PRELPP51888 382 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 DCAF6Q58WW2 860 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 WDR44Q5JSH3 913 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 RELL1Q8IUW5 271 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 RCOR2Q8IZ40 523 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 SNX31Q8N9S9 440 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 LZICQ8WZA0 190 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 MKL1Q969V6 931 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 TMEM79Q9BSE2 394 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 TRPV6Q9H1D0 765 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 WDR55Q9H6Y2 383 aaPredicted RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 PCDH9Q9HC56 1237 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 HNRNPDLO14979 420 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 SAT1P21673 171 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 CD97P48960 835 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 RELAQ04206 551 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 SULT2A1Q06520 285 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 TFDP3Q5H9I0 405 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 FBXW8Q8N3Y1 598 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 ZNF778Q96MU6 729 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
HERC6-202ENST00000273960 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 TJP2Q9UDY2 1190 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 EFR3BQ9Y2G0 817 aa13.24□□□□□ -0.29
HERC6-202ENST00000273960 SF3B1O75533 1304 aaKnown RBP eCLIP13.24□□□□□ -0.29
HERC6-202ENST00000273960 K7EPI3 171 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 EPHA3P29320 983 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SLC1A6P48664 564 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 THOP1P52888 689 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 GSTM4Q03013 218 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 PPM1JQ5JR12 505 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ZNF362Q5T0B9 420 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 CYP2R1Q6VVX0 501 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 TRIM72Q6ZMU5 477 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CHSY1Q86X52 802 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 LILRA2Q8N149 483 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SLC44A1Q8WWI5 657 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 FOXP3Q9BZS1 431 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 MRPL47Q9HD33 250 aaKnown RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 hCG_1818297A0A087WSY0 165 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 HTR3EA5X5Y0 456 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 TPST1O60507 370 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 E2F6O75461 281 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CSH1P0DML2 217 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CSH2P0DML3 217 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 NR4A1P22736 598 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 NDST2P52849 883 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 NR1H2P55055 460 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 TTC39BQ5VTQ0 682 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 SLC9A4Q6AI14 798 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 CHST15Q7LFX5 561 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 NAT16Q8N8M0 369 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
HERC6-202ENST00000273960 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 LENG8Q96PV6 779 aaPredicted RBP13.23□□□□□ -0.29
HERC6-202ENST00000273960 RBM38Q9H0Z9 239 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms