RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZFP14Q9HCL3 533 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 CA14Q9ULX7 337 aa25.72■■□□□ 1.71
SSBP4-201ENST00000270061 NUP210Q8TEM1 1887 aaPredicted RBP25.71■■□□□ 1.71
SSBP4-201ENST00000270061 MYBPHLA2RUH7 354 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 PDGFRBP09619 1106 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 GABRR2P28476 465 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 BRD3Q15059 726 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 GOLGA7BQ2TAP0 167 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 TANGO2Q6ICL3 276 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 FAM171BQ6P995 826 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 GAREM2Q75VX8 874 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 XYLT1Q86Y38 959 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 CPNE8Q86YQ8 564 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 FLCNQ8NFG4 579 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 UBA3Q8TBC4 463 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 RUBCNQ92622 972 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 SMARCD2Q92925 531 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 FUBP3Q96I24 572 aaKnown RBP eCLIP25.71■■□□□ 1.71
SSBP4-201ENST00000270061 TNIP3Q96KP6 325 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 ATXN3LQ9H3M9 355 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 OBSL1O75147 1896 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 GREB1Q4ZG55 1949 aa25.71■■□□□ 1.71
SSBP4-201ENST00000270061 CCDC188H7C350 402 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 ATP2C2O75185 946 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 CYP2F1P24903 491 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 RWDD2BP57060 319 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 RNASE9P60153 205 aaKnown RBP25.7■■□□□ 1.7
SSBP4-201ENST00000270061 PSMC1P62191 440 aaKnown RBP25.7■■□□□ 1.7
SSBP4-201ENST00000270061 RPL7AP62424 266 aaKnown RBP25.7■■□□□ 1.7
SSBP4-201ENST00000270061 MAPRE1Q15691 268 aaKnown RBP25.7■■□□□ 1.7
SSBP4-201ENST00000270061 CCDC142Q17RM4 750 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 C4orf50Q6ZRC1 276 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 ZSCAN18Q8TBC5 510 aaPredicted RBP25.7■■□□□ 1.7
SSBP4-201ENST00000270061 STK32AQ8WU08 396 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 PNKPQ96T60 521 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 DPEP3Q9H4B8 488 aa25.7■■□□□ 1.7
SSBP4-201ENST00000270061 KRBA1A5PL33 1030 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 ERBB2P04626 1255 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 FCARP24071 287 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 MCM3P25205 808 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 MARCKSL1P49006 195 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 RPL10AP62906 217 aaKnown RBP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 ASTLQ6HA08 431 aaPredicted RBP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 DCUN1D2Q6PH85 259 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 NIPA2Q8N8Q9 360 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 FNIP1Q8TF40 1166 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 PLA2G2FQ9BZM2 168 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 SYNCQ9H7C4 482 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 HESX1Q9UBX0 185 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 CACNA1HO95180 2353 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 CCDC151A5D8V7 595 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 PIGHQ14442 188 aaPredicted RBP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 MTERF4Q7Z6M4 381 aaKnown RBP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 TTC30AQ86WT1 665 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 IPO4Q8TEX9 1081 aaKnown RBP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 SLC35F5Q8WV83 523 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 MCEEQ96PE7 176 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 GCNAQ96QF7 691 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 CRTAC1Q9NQ79 661 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 ARHGEF3Q9NR81 526 aa25.69■■□□□ 1.7
SSBP4-201ENST00000270061 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.69■■□□□ 1.7
SSBP4-201ENST00000270061 PSTPIP1O43586 416 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 GJB6O95452 261 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 FGGP02679 453 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 KRT3P12035 628 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 CDC25CP30307 473 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 GPR15P49685 360 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 CLCN5P51795 746 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 CLCN6P51797 869 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 PFKPQ01813 784 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 DDR2Q16832 855 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 IER5LQ5T953 404 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 ANKRD52Q8NB46 1076 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 LRRC1Q9BTT6 524 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 SLC4A5Q9BY07 1137 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 TJP2Q9UDY2 1190 aa25.68■■□□□ 1.7
SSBP4-201ENST00000270061 STK25O00506 426 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 CSH1P0DML2 217 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 CSH2P0DML3 217 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 NPR3P17342 541 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 SNX16P57768 344 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 ARHGAP15Q53QZ3 475 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 STXBP5Q5T5C0 1151 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 SEL1L2Q5TEA6 688 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 CWF19L1Q69YN2 538 aaKnown RBP25.67■■□□□ 1.7
SSBP4-201ENST00000270061 RHOT1Q8IXI2 618 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 MYLPFQ96A32 169 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 PRRX2Q99811 253 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 TRPV4Q9HBA0 871 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 CYLDQ9NQC7 956 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 FAM49BQ9NUQ9 324 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 KRIT1O00522 736 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 PYGMP11217 842 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 ZNF252P-AS1Q0IIN9 211 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 ZNF211Q13398 564 aaPredicted RBP25.67■■□□□ 1.7
SSBP4-201ENST00000270061 LONRF2Q1L5Z9 754 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 SDHAF4Q5VUM1 108 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 TMEM110Q86TL2 294 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 MYCBPAPQ8TBZ2 947 aa25.67■■□□□ 1.7
SSBP4-201ENST00000270061 HNRNPLLQ8WVV9 542 aaKnown RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms