RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PAGE5Q96GU1 130 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 RAD9AQ99638 391 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 TUBGCP2Q9BSJ2 902 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 TRMT61BQ9BVS5 477 aaKnown RBP8.07□□□□□ -1.12
USP3-201ENST00000268049 ARHGAP39Q9C0H5 1083 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 BRD8Q9H0E9 1235 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 NHEJ1Q9H9Q4 299 aaPredicted RBP8.07□□□□□ -1.12
USP3-201ENST00000268049 CD207Q9UJ71 328 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 ERVW-1Q9UQF0 538 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 SNCAIPQ9Y6H5 919 aa8.07□□□□□ -1.12
USP3-201ENST00000268049 AFDNP55196 1824 aaKnown RBP8.07□□□□□ -1.12
USP3-201ENST00000268049 NEMP2A6NFY4 417 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 RASA4BC9J798 803 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 KPNA3O00505 521 aaPredicted RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 RASA4O43374 803 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 LRRN2O75325 713 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 APOA4P06727 396 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ITGALP20701 1170 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 GTF2E2P29084 291 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 BCAR1P56945 870 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 TMPRSS15P98073 1019 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 DLK2Q6UY11 383 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 GRAMD1CQ8IYS0 662 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CYFIP2Q96F07 1278 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 HES6Q96HZ4 224 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CCT7Q99832 543 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 SYT15Q9BQS2 421 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 SH2D3AQ9BRG2 576 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 AP1M1Q9BXS5 423 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 NSUN3Q9H649 340 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 POLD4Q9HCU8 107 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 INTS7Q9NVH2 962 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 PKD2L2Q9NZM6 624 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 FAM170AA1A519 330 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 HDCP19113 662 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 AKT2P31751 481 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 NCOA4Q13772 614 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 LY6KQ17RY6 165 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CEP78Q5JTW2 689 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 PRAMEF19Q5SWL8 479 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 LRRC8BQ6P9F7 803 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 TRPM8Q7Z2W7 1104 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CCDC103Q8IW40 242 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 TRIM59Q8IWR1 403 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ATP11CQ8NB49 1132 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 DYRK1BQ9Y463 629 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 BTAF1O14981 1849 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 IQANK1A0A1B0GTG1 560 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 C2orf81A6NN90 581 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 STX7O15400 261 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 MFAP3LO75121 409 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 KCNA5P22460 613 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ACLYP53396 1101 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ITGB3BPQ13352 177 aaPredicted RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 HIC1Q14526 733 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 KRT31Q15323 416 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 MIB1Q86YT6 1006 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 OR6P1Q8NGX9 317 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 FAM81AQ8TBF8 368 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 RUBCNQ92622 972 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 SMARCD1Q96GM5 515 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 KCTD5Q9NXV2 234 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 BTBD7Q9P203 1132 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 PCDHA13Q9Y5I0 950 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 PP2D1A8MPX8 630 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 RBAK-RBAKDNI3L0D1 243 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 HS6ST1O60243 411 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 AVILO75366 819 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ITGB6P18564 788 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 DDX6P26196 483 aaKnown RBP eCLIP8.06□□□□□ -1.12
USP3-201ENST00000268049 RPL21P46778 160 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 NPEPPSP55786 919 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 GFPT1Q06210 699 aaPredicted RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 SLC12A1Q13621 1099 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 ACOX1Q15067 660 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 IZUMO3Q5VZ72 239 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 RHOT2Q8IXI1 618 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 TAB3Q8N5C8 712 aaPredicted RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 MAGEC3Q8TD91 643 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 TTC17Q96AE7 1141 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 REXO5Q96IC2 774 aaKnown RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 SERPINB11Q96P15 392 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 FDXACB1Q9BRP7 624 aaPredicted RBP8.06□□□□□ -1.12
USP3-201ENST00000268049 ADGRE3Q9BY15 652 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 UNC93B1Q9H1C4 597 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 NKX2-4Q9H2Z4 354 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CASS4Q9NQ75 786 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 GULP1Q9UBP9 304 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 Q9Y3F1 56 aa8.06□□□□□ -1.12
USP3-201ENST00000268049 CCT8L1PA6NM43 557 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 PER2O15055 1255 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 MSH4O15457 936 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 RASSF9O75901 435 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 FAM107AO95990 144 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 PPP3CCP48454 512 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 ARHGDIAP52565 204 aa8.05□□□□□ -1.12
USP3-201ENST00000268049 ZBED6P86452 979 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms