RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CDH3P22223 829 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF605Q86T29 641 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 FAM81AQ8TBF8 368 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 TRPC4APQ8TEL6 797 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 POP5Q969H6 163 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 MASTLQ96GX5 879 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 C9orf72Q96LT7 481 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 RAVER2Q9HCJ3 691 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 SMCO3A2RU48 225 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 ERN1O75460 977 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 ODC1P11926 461 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 SLC11A2P49281 568 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 CDH18Q13634 790 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 EIF2S3LQ2VIR3 472 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 NEK5Q6P3R8 708 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 RIN2Q8WYP3 895 aaPredicted RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 REPS1Q96D71 796 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF184Q99676 751 aaPredicted RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 PCDHB7Q9Y5E2 793 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 MROH7-TTC4A0A0A0MT08 1334 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 EZH2Q15910 746 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 ATG14Q6ZNE5 492 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 PDGFCQ9NRA1 345 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 AGAP1Q9UPQ3 857 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 NCAM2O15394 837 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 XRCC4Q13426 336 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 EIF3MQ7L2H7 374 aaKnown RBP12.42□□□□□ -0.42
SRRM4-201ENST00000267260 SLC25A41Q8N5S1 370 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 SERAC1Q96JX3 654 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 NINQ8N4C6 2090 aa12.42□□□□□ -0.42
SRRM4-201ENST00000267260 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 MAPK7Q13164 816 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 TOP3AQ13472 1001 aaPredicted RBP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 FAM228AQ86W67 206 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 BAIAP2Q9UQB8 552 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ALOX5P09917 674 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ETFBP38117 255 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 DGKDQ16760 1214 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 WRNIP1Q96S55 665 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 RRN3Q9NYV6 651 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ANKRD6Q9Y2G4 727 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 SIK3Q9Y2K2 1263 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 TEX33O43247 280 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 MAGEA2P43356 314 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 GRIK3Q13003 919 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 C5orf22Q49AR2 442 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 TTLL6Q8N841 843 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 OR6Y1Q8NGX8 325 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 TMEM132BQ14DG7 1078 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 PDPK2PQ6A1A2 396 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 EXOC3L1Q86VI1 746 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 DCP1BQ8IZD4 617 aaKnown RBP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 FAM71DQ8N9W8 422 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF335Q9H4Z2 1342 aaPredicted RBP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 CNTRLQ7Z7A1 2325 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 SCGNO76038 276 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 PCNAP12004 261 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 CYP24A1Q07973 514 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 JMJD4Q9H9V9 463 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 AKAP7Q9P0M2 348 aaPredicted RBP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 E2F8A0AVK6 867 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 MGRN1O60291 552 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 CMTM6Q9NX76 183 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 HIRAP54198 1017 aaPredicted RBP12.41□□□□□ -0.42
SRRM4-201ENST00000267260 GOLGA7BQ2TAP0 167 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 BOLA3Q53S33 107 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 XKR3Q5GH77 459 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 Q96MT0 163 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ASB2Q96Q27 587 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 CHP1Q99653 195 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 SNX8Q9Y5X2 465 aa12.41□□□□□ -0.42
SRRM4-201ENST00000267260 ZNF879B4DU55 563 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 CST8O60676 142 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 OR6B1O95007 311 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 RASA1P20936 1047 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 RBBP4Q09028 425 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 CAMK1DQ8IU85 385 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 LRRC34Q8IZ02 419 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 OR2W6PQ8NHA6 318 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 TPCN2Q8NHX9 752 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 UCMAQ8WVF2 138 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 C17orf50Q8WW18 174 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 SPIRE2Q8WWL2 714 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
SRRM4-201ENST00000267260 MGAT4AQ9UM21 535 aa12.4□□□□□ -0.42
SRRM4-201ENST00000267260 BST2Q10589 180 aaKnown RBP12.4□□□□□ -0.42
SRRM4-201ENST00000267260 KLHL32Q96NJ5 620 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms