RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DCDC2Q9UHG0 476 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 ACTL7BQ9Y614 415 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 COL1A1P02452 1464 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 SLC25A27O95847 323 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 SERPINB1P30740 379 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 PCSK7Q16549 785 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 WLSQ5T9L3 541 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 LPCAT4Q643R3 524 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 RBM44Q6ZP01 1051 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 IPMKQ8NFU5 416 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TRAPPC12Q8WVT3 735 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 RNF181Q9P0P0 153 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 AP4S1Q9Y587 144 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 BAZ2AQ9UIF9 1905 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 ARFGEF2Q9Y6D5 1785 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 IGKV6D-41A0A0C4DH26 115 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 NFKBIAP25963 317 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 DSG3P32926 999 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 MSX2P35548 267 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 SERPINB10P48595 397 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 JAM2P57087 298 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TAS2R40P59535 323 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 NEDD8Q15843 81 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 ZACNQ401N2 412 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 B3GNT6Q6ZMB0 384 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FRA10AC1Q70Z53 315 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FBXO16Q8IX29 292 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 MICU2Q8IYU8 434 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 UCMAQ8WVF2 138 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 EZH1Q92800 747 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 EIF2AQ9BY44 585 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 NMUR2Q9GZQ4 415 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 HACD3Q9P035 362 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 KLK14Q9P0G3 267 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 KIF17Q9P2E2 1029 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 AJAP1Q9UKB5 411 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 A0A087WZ62 844 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 C16orf96A6NNT2 1141 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 KRT75O95678 551 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 MIPP30301 263 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 CACNB2Q08289 660 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 PDK2Q15119 407 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 CCDC85BQ15834 202 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 DGKDQ16760 1214 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 TDRD10Q5VZ19 366 aaKnown RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 STRA8Q7Z7C7 330 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 SH3TC2Q8TF17 1288 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 RMND5BQ96G75 393 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 FDXACB1Q9BRP7 624 aaPredicted RBP11.89□□□□□ -0.51
VPS33A-201ENST00000267199 CHST12Q9NRB3 414 aa11.89□□□□□ -0.51
VPS33A-201ENST00000267199 CSPG5O95196 566 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 VTNP04004 478 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 C6orf222P0C671 652 aaPredicted RBP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 HSPA1AP0DMV8 641 aaKnown RBP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 HSPA1BP0DMV9 641 aaKnown RBP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 GRK2P25098 689 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 CHN2P52757 468 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 LY6KQ17RY6 165 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 METTL7BQ6UX53 244 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ZPBP2Q6X784 338 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 DHDDSQ86SQ9 333 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 OR5B17Q8NGF7 314 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 GALNT8Q9NY28 637 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 KCNK4Q9NYG8 393 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 PLA2G4CQ9UP65 541 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 SDR42E2A6NKP2 422 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 SUPT7LO94864 414 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 GLRA2P23416 452 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 HIRAP54198 1017 aaPredicted RBP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 DGKZQ13574 1117 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ADRM1Q16186 407 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 IMPG1Q17R60 797 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 AGKQ53H12 422 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 DENND1BQ6P3S1 775 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 C4orf22Q6V702 233 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 FAM136AQ96C01 138 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 CPB2Q96IY4 423 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 PIF1Q9H611 641 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 MAN1C1Q9NR34 630 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 RPTORQ8N122 1335 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
VPS33A-201ENST00000267199 PRR5-ARHGAP8B1AHC4 643 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 BNIP3LO60238 219 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 SERPINE1P05121 402 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 ACADSBP45954 432 aa11.88□□□□□ -0.51
VPS33A-201ENST00000267199 CLK1P49759 484 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms