RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FAM171A1Q5VUB5 890 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 DDI1Q8WTU0 396 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 KAT2BQ92831 832 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 EME1Q96AY2 570 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 CCDC126Q96EE4 140 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SENP8Q96LD8 212 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 ACO2Q99798 780 aaKnown RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 UBXN6Q9BZV1 441 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 GID8Q9NWU2 228 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 NINJ2Q9NZG7 142 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 ARHGAP10A1A4S6 786 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SYNDIG1LA6NDD5 238 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TBKBP1A7MCY6 615 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 LYPLA2O95372 231 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SOX11P35716 441 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 KPNA1P52294 538 aaPredicted RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 IRX1P78414 480 aaPredicted RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 AADACL2Q6P093 401 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 KCNT2Q6UVM3 1135 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 ZSWIM2Q8NEG5 633 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 PGLYRP2Q96PD5 576 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 IL1RL2Q9HB29 575 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SLC24A3Q9HC58 644 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SCUBE2Q9NQ36 999 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 STX18Q9P2W9 335 aaKnown RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 UMODL1Q5DID0 1318 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 CBX4O00257 560 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 CYP1A2P05177 515 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TNFSF9P41273 254 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TBX4P57082 545 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TFAP2DQ7Z6R9 452 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 IRF2BP1Q8IU81 584 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TBC1D19Q8N5T2 526 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 OR5B17Q8NGF7 314 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 FAM136AQ96C01 138 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 INPP4AQ96PE3 977 aaPredicted RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 WWOXQ9NZC7 414 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 HES2Q9Y543 173 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SNCAIPQ9Y6H5 919 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 TM9SF1O15321 606 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 MED21Q13503 144 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 UNC93AQ86WB7 457 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SUGP1Q8IWZ8 645 aaKnown RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 TEX12Q9BXU0 123 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 FMN2Q9NZ56 1722 aa14.4□□□□□ -0.11
CDH3-201ENST00000264012 SIGLEC16A6NMB1 481 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SASH3O75995 380 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 KRT16P08779 473 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 EPHB3P54753 998 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 RHOAP61586 193 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 FMO1Q01740 532 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 POU6F1Q14863 301 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CXCL17Q6UXB2 119 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ILDR2Q71H61 639 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SH3GL3Q99963 347 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 RNF112Q9ULX5 631 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CPA3P15088 417 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 DNAJB2P25686 324 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CDH17Q12864 832 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CYTH1Q15438 398 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ADAM2Q99965 735 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 TBC1D13Q9NVG8 400 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 RNF103O00237 685 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 PQBP1O60828 265 aaKnown RBP14.39□□□□□ -0.11
CDH3-201ENST00000264012 CRTAMO95727 393 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 LTFP02788 710 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 BGNP21810 368 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 KDELR1P24390 212 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 PPP3CCP48454 512 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 TUBP50607 506 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 PRAMEF19Q5SWL8 479 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 GJC2Q5T442 439 aaPredicted RBP14.39□□□□□ -0.11
CDH3-201ENST00000264012 RRM2BQ7LG56 351 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 CEP70Q8NHQ1 597 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 TUBGCP3Q96CW5 907 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 NAF1Q96HR8 494 aaKnown RBP14.39□□□□□ -0.11
CDH3-201ENST00000264012 SERPINB11Q96P15 392 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 POPDC2Q9HBU9 364 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ARHGAP26Q9UNA1 814 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ATP11BQ9Y2G3 1177 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 ZMYM2Q9UBW7 1377 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 MAGEB16A2A368 324 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SPDYE5A6NIY4 337 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 O00370 1275 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 RAMP2O60895 175 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 H2AFYO75367 372 aaKnown RBP14.39□□□□□ -0.11
CDH3-201ENST00000264012 TOMM70O94826 608 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 TPH1P17752 444 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 NUDT2P50583 147 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 SCNN1BP51168 640 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 AQP5P55064 265 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 STX5Q13190 355 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
CDH3-201ENST00000264012 SPDYE7PQ495Y7 208 aa14.39□□□□□ -0.11
CDH3-201ENST00000264012 TMEM86AQ8N2M4 240 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms