RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 LCP1P13796 627 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 CORO1AP31146 461 aaKnown RBP16.83■□□□□ 0.28
USE1-201ENST00000263897 RGS7P49802 495 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 ARHGAP8P85298 464 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 LMNB2Q03252 620 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 RSPO4Q2I0M5 234 aaPredicted RBP16.83■□□□□ 0.28
USE1-201ENST00000263897 USP39Q53GS9 565 aaKnown RBP16.83■□□□□ 0.28
USE1-201ENST00000263897 C10orf76Q5T2E6 689 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 RNF139Q8WU17 664 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 CRACR2AQ9BSW2 395 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 ABCC13Q9NSE7 274 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 SEMA4GQ9NTN9 838 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 DLL3Q9NYJ7 618 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 AGO1Q9UL18 857 aaKnown RBP16.83■□□□□ 0.28
USE1-201ENST00000263897 HCN2Q9UL51 889 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 CACNA1AO00555 2505 aa16.83■□□□□ 0.28
USE1-201ENST00000263897 M0QYV0 167 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 DCLK1O15075 740 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 ADAM23O75077 832 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 ALDH1A2O94788 518 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 DAOAP59103 153 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 PUM1Q14671 1186 aaKnown RBP eCLIP16.82■□□□□ 0.28
USE1-201ENST00000263897 TRIP4Q15650 581 aaPredicted RBP16.82■□□□□ 0.28
USE1-201ENST00000263897 CSRP2Q16527 193 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 PLK5Q496M5 336 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 ANO7Q6IWH7 933 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 DENND1CQ8IV53 801 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 ZNF513Q8N8E2 541 aaPredicted RBP16.82■□□□□ 0.28
USE1-201ENST00000263897 IRGQQ8WZA9 623 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 EDEM1Q92611 657 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 PLD4Q96BZ4 506 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 P2RY11Q96G91 374 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 HSFY1Q96LI6 401 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 DUSP15Q9H1R2 295 aaPredicted RBP16.82■□□□□ 0.28
USE1-201ENST00000263897 POLMQ9NP87 494 aaPredicted RBP16.82■□□□□ 0.28
USE1-201ENST00000263897 ZDHHC4Q9NPG8 344 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 PLK2Q9NYY3 685 aa16.82■□□□□ 0.28
USE1-201ENST00000263897 PENKP01210 267 aaPredicted RBP16.81■□□□□ 0.28
USE1-201ENST00000263897 KRT5P13647 590 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 SLC9A1P19634 815 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 SDHBP21912 280 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 GPD2P43304 727 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 DGKGP49619 791 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 MFAP3P55082 362 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
USE1-201ENST00000263897 GBP6Q6ZN66 633 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 TOGARAM2Q6ZUX3 1019 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 ENOSF1Q7L5Y1 443 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 ERMP1Q7Z2K6 904 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 TRMT11Q7Z4G4 463 aaKnown RBP16.81■□□□□ 0.28
USE1-201ENST00000263897 FMNL3Q8IVF7 1028 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 CPXM2Q8N436 756 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 MDGA1Q8NFP4 955 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 BHMTQ93088 406 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 FAM81BQ96LP2 452 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 TPSD1Q9BZJ3 242 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 ARRDC1-AS1Q9H2J1 176 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 SFMBT1Q9UHJ3 866 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 INVSQ9Y283 1065 aa16.81■□□□□ 0.28
USE1-201ENST00000263897 HBS1LQ9Y450 684 aaKnown RBP16.81■□□□□ 0.28
USE1-201ENST00000263897 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.81■□□□□ 0.28
USE1-201ENST00000263897 GON4LQ3T8J9 2241 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 GTPBP10A4D1E9 387 aaKnown RBP16.8■□□□□ 0.28
USE1-201ENST00000263897 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 PIK3R2O00459 728 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 FOXD2O60548 495 aaPredicted RBP16.8■□□□□ 0.28
USE1-201ENST00000263897 RHOBTB1O94844 696 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 FBXO21O94952 628 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 EPN2O95208 641 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 ERCC5P28715 1186 aaPredicted RBP16.8■□□□□ 0.28
USE1-201ENST00000263897 NTSR1P30989 418 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 RPL34P49207 117 aaKnown RBP16.8■□□□□ 0.28
USE1-201ENST00000263897 FOXK2Q01167 660 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 FYB2Q5VWT5 728 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 FAM217AQ8IXS0 508 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 OLIG1Q8TAK6 271 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 ZNF606Q8WXB4 792 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 NUP62CLQ9H1M0 184 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 THAP9Q9H5L6 903 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 SLC27A6Q9Y2P4 619 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 DMXL1Q9Y485 3027 aa16.8■□□□□ 0.28
USE1-201ENST00000263897 THADAQ6YHU6 1953 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
USE1-201ENST00000263897 LTFP02788 710 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 PON1P27169 355 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 MTIF2P46199 727 aaKnown RBP16.79■□□□□ 0.28
USE1-201ENST00000263897 HARS2P49590 506 aaKnown RBP16.79■□□□□ 0.28
USE1-201ENST00000263897 ELF2Q15723 593 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 MEA1Q16626 185 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 EXOC3L4Q17RC7 722 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 DPCR1Q3MIW9 517 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 EGFLAMQ63HQ2 1017 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 MSANTD2Q6P1R3 559 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 PRR23CQ6ZRP0 262 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 C11orf74Q86VG3 221 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 SCUBE3Q8IX30 993 aa16.79■□□□□ 0.28
USE1-201ENST00000263897 CLEC4CQ8WTT0 213 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms