RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CALB1P05937 261 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 ABCB4P21439 1286 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 C1QBPQ07021 282 aaKnown RBP19.14■□□□□ 0.65
SDF4-201ENST00000263741 TNK2Q07912 1038 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 MSANTD2Q6P1R3 559 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 TADA2BQ86TJ2 420 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 ZDHHC17Q8IUH5 632 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 YAF2Q8IY57 180 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 TTC8Q8TAM2 541 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 SLC2A13Q96QE2 648 aa19.14■□□□□ 0.65
SDF4-201ENST00000263741 TRMT61BQ9BVS5 477 aaKnown RBP19.14■□□□□ 0.65
SDF4-201ENST00000263741 NHEJ1Q9H9Q4 299 aaPredicted RBP19.14■□□□□ 0.65
SDF4-201ENST00000263741 FCHO2Q0JRZ9 810 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 ASTE1Q2TB18 679 aaPredicted RBP19.13■□□□□ 0.65
SDF4-201ENST00000263741 CDK5RAP1Q96SZ6 601 aaKnown RBP19.13■□□□□ 0.65
SDF4-201ENST00000263741 OLA1Q9NTK5 396 aaKnown RBP19.13■□□□□ 0.65
SDF4-201ENST00000263741 STRIP2Q9ULQ0 834 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 TECTAO75443 2155 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 AKR1B10O60218 316 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 RTN2O75298 545 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 STC2O76061 302 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
SDF4-201ENST00000263741 OTUD1Q5VV17 481 aaPredicted RBP19.13■□□□□ 0.65
SDF4-201ENST00000263741 ZNF276Q8N554 614 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 DEPDC1BQ8WUY9 529 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 NXPE3Q969Y0 559 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 ZNF653Q96CK0 615 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 BRD9Q9H8M2 597 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 FAM204AQ9H8W3 233 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 ASNSD1Q9NWL6 643 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 OBP2AQ9NY56 170 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 CALCOCO1Q9P1Z2 691 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 TMEM59LQ9UK28 342 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 NENFQ9UMX5 172 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 DUSP12Q9UNI6 340 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 SH3BP1Q9Y3L3 701 aa19.13■□□□□ 0.65
SDF4-201ENST00000263741 GLI1P08151 1106 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 GZMAP12544 262 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 ARSAP15289 507 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 CCDC122Q5T0U0 273 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 DNAJC24Q6P3W2 148 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 ALKBH5Q6P6C2 394 aaKnown RBP19.12■□□□□ 0.65
SDF4-201ENST00000263741 BBS7Q8IWZ6 715 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 PACSIN1Q9BY11 444 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 LINC00597Q9H2U6 94 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 EBF3Q9H4W6 596 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 MYO1AQ9UBC5 1043 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 SSU72P8A0A1W2PR75 194 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 TCRBV5S1A1TA0A578 114 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 TRUB2O95900 331 aaKnown RBP19.12■□□□□ 0.65
SDF4-201ENST00000263741 KLKB1P03952 638 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 F5P12259 2224 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 SLC18A3Q16572 532 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
SDF4-201ENST00000263741 C3orf20Q8ND61 904 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 E2F7Q96AV8 911 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 MCEEQ96PE7 176 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 SELENOOQ9BVL4 669 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 ISCUQ9H1K1 167 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 GTSE1Q9NYZ3 720 aa19.12■□□□□ 0.65
SDF4-201ENST00000263741 SOWAHDA6NJG2 315 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 ZNF263O14978 683 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 GREM1O60565 184 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 SRFP11831 508 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 CORO1AP31146 461 aaKnown RBP19.11■□□□□ 0.65
SDF4-201ENST00000263741 RFC1P35251 1148 aaPredicted RBP19.11■□□□□ 0.65
SDF4-201ENST00000263741 SULT1E1P49888 294 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 RPL7AP62424 266 aaKnown RBP19.11■□□□□ 0.65
SDF4-201ENST00000263741 NME3Q13232 169 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 RAB6CQ53S08 254 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 CCDC42Q96M95 316 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 PANX2Q96RD6 677 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 RAB6CQ9H0N0 254 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 THAP2Q9H0W7 228 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 DDIT4Q9NX09 232 aa19.11■□□□□ 0.65
SDF4-201ENST00000263741 DUS2Q9NX74 493 aaKnown RBP19.11■□□□□ 0.65
SDF4-201ENST00000263741 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.11■□□□□ 0.651e-6■■■□□ 14.8
SDF4-201ENST00000263741 CNOT8Q9UFF9 292 aaKnown RBP19.11■□□□□ 0.65
SDF4-201ENST00000263741 OTOL1A6NHN0 477 aaPredicted RBP19.1■□□□□ 0.65
SDF4-201ENST00000263741 ARNTLO00327 626 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 SCNN1AP37088 669 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 MATKP42679 507 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 ATXN1P54253 815 aaKnown RBP19.1■□□□□ 0.65
SDF4-201ENST00000263741 VCPP55072 806 aaKnown RBP19.1■□□□□ 0.65
SDF4-201ENST00000263741 GSCP56915 257 aaPredicted RBP19.1■□□□□ 0.65
SDF4-201ENST00000263741 DDX42Q86XP3 938 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDF4-201ENST00000263741 TBCBQ99426 244 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 TRIM62Q9BVG3 475 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 TRIM7Q9C029 511 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 HPS4Q9NQG7 708 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 WDR35Q9P2L0 1181 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 IMPACTQ9P2X3 320 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 IRAK2O43187 625 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 IGLV3-25P01717 112 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 KRT3P12035 628 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 TCF3P15923 654 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 NOS2P35228 1153 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 SOX9P48436 509 aa19.1■□□□□ 0.65
SDF4-201ENST00000263741 IFNAR2P48551 515 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms