RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 DQX1Q8TE96 717 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 ZNF592Q92610 1267 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 CNPY3Q9BT09 278 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 PRKD2Q9BZL6 878 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 A0A1W2PRU2 124 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 GJC1P36383 396 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 TXNRD3NBQ6F5E7 133 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 C11orf63Q6NUN7 778 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 LEKR1Q6ZMV7 388 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 RSRC2Q7L4I2 434 aaKnown RBP28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 PACS2Q86VP3 889 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 EFHBQ8N7U6 833 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 TRIM58Q8NG06 486 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 ALS2CR12Q96Q35 445 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 NPY6RQ99463 290 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 ASAH2Q9NR71 780 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 TRPM5Q9NZQ8 1165 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 DNAI1Q9UI46 699 aa28.66■■■□□ 2.18
SMARCD3-201ENST00000262188 M0QYT0 321 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 DPYSL4O14531 572 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 LRCH4O75427 683 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 C1RP00736 705 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 MARCKSL1P49006 195 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 SLC5A9Q2M3M2 681 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 ARCQ7LC44 396 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 NT5DC3Q86UY8 548 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 FNIP1Q8TF40 1166 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 HDAC7Q8WUI4 952 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 ZDHHC7Q9NXF8 308 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 PCSK1NQ9UHG2 260 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 PRUNE2Q8WUY3 3088 aa28.65■■■□□ 2.18
SMARCD3-201ENST00000262188 SPOPO43791 374 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 TLR5O60602 858 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 RHOP08100 348 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 HNRNPA1P09651 372 aaKnown RBP eCLIP28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 HOXA9P31269 272 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 HDAC4P56524 1084 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 EFEMP1Q12805 493 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 SLC25A52Q3SY17 297 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 C10orf120Q5SQS8 335 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 TXNDC8Q6A555 127 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 CC2D1AQ6P1N0 951 aaPredicted RBP28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 ACSF2Q96CM8 615 aaPredicted RBP28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 NOTCH4Q99466 2003 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 TRPC7Q9HCX4 862 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 SUFUQ9UMX1 484 aa28.64■■■□□ 2.18
SMARCD3-201ENST00000262188 PIGHQ14442 188 aaPredicted RBP28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 PEX26Q7Z412 305 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 RNF139Q8WU17 664 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 MYLIPQ8WY64 445 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 SMG7Q92540 1137 aaKnown RBP28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 KRT35Q92764 455 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 NT5C3BQ969T7 300 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 SLC22A12Q96S37 553 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 CYP2S1Q96SQ9 504 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 PSMB7Q99436 277 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 FAM204AQ9H8W3 233 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 TMPRSS4Q9NRS4 437 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 PIGVQ9NUD9 493 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 EHD2Q9NZN4 543 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 OBSL1O75147 1896 aa28.64■■■□□ 2.17
SMARCD3-201ENST00000262188 ANAPC1Q9H1A4 1944 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 TRUB2O95900 331 aaKnown RBP28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 PTPN9P43378 593 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 ETF1P62495 437 aaKnown RBP28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 SCYL2Q6P3W7 929 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 MIB1Q86YT6 1006 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 ARHGAP18Q8N392 663 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 PEBP4Q96S96 227 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 ATXN3LQ9H3M9 355 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 PIDD1Q9HB75 910 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 DDIT4Q9NX09 232 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 LMCD1Q9NZU5 365 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 UXTQ9UBK9 157 aaPredicted RBP28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 DPP7Q9UHL4 492 aa28.63■■■□□ 2.17
SMARCD3-201ENST00000262188 XYLBO75191 536 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 TBX10O75333 385 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 ATP1A1P05023 1023 aaKnown RBP28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 PTPN2P17706 415 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 IL1R2P27930 398 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 ADAM15Q13444 863 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 ATP13A4Q4VNC1 1196 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 SYCE2Q6PIF2 218 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 FAM131BQ86XD5 332 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 NIPA2Q8N8Q9 360 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 PDZD8Q8NEN9 1154 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 MAGEB5Q9BZ81 275 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 RNF38Q9H0F5 515 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 SFXN1Q9H9B4 322 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 KLHL11Q9NVR0 708 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 CLDND1Q9NY35 253 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 CLIC5Q9NZA1 410 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 STAP1Q9ULZ2 295 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 C2orf16Q68DN1 1984 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 MIPP30301 263 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 SHKBP1Q8TBC3 707 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 FAM107BQ9H098 131 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 CLEC1BQ9P126 229 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 RASAL2Q9UJF2 1139 aa28.62■■■□□ 2.17
SMARCD3-201ENST00000262188 COCHO43405 550 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms