RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PCYT1AP49585 367 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 TSC22D1Q15714 1073 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 IL17RAQ96F46 866 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
SPG11-201ENST00000261866 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 MUTP22033 750 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CCR1P32246 355 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CCNI2Q6ZMN8 369 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 BNIPLQ7Z465 357 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 TARSP26639 723 aaKnown RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 DLG4P78352 724 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CYP51A1Q16850 503 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 KIAA1324Q6UXG2 1013 aaKnown RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 ADCK1Q86TW2 530 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 RIC8BQ9NVN3 520 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 TRPC1P48995 793 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CBWD3Q5JTY5 395 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CBWD5Q5RIA9 395 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 AGAP9Q5VTM2 703 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 OTOP1Q7RTM1 612 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CCDC60Q8IWA6 550 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CAPN6Q9Y6Q1 641 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 F8VZ95 297 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 USP12O75317 370 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 GPR142Q7Z601 462 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 ZC3H15Q8WU90 426 aaKnown RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 KANSL3Q9P2N6 904 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 STOML1Q9UBI4 398 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 ARL2BPQ9Y2Y0 163 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 TERF2Q15554 542 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 NAT16Q8N8M0 369 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 IPCEF1Q8WWN9 437 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 LRRC4BQ9NT99 713 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 MSRAQ9UJ68 235 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 BARX2Q9UMQ3 279 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 CAB39Q9Y376 341 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 KDM4FA0A1W2PPD8 638 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 NR5A2O00482 541 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 KPNA6O60684 536 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 ABCG1P45844 678 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 KHDRBS2Q5VWX1 349 aaKnown RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
SPG11-201ENST00000261866 GPAMQ9HCL2 828 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 ACP6Q9NPH0 428 aa12.51□□□□□ -0.41
SPG11-201ENST00000261866 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPG11-201ENST00000261866 UBA1P22314 1058 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 POU1F1P28069 291 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 RARRES1P49788 294 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 ZBTB10Q96DT7 871 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 EIF3LQ9Y262 564 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 SDR42E2A6NKP2 422 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 EVPLLA8MZ36 301 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 IFRD1O00458 451 aaPredicted RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 CD52P31358 61 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 TINF2Q9BSI4 451 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 KCNK1O00180 336 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 RAMP2O60895 175 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 RASSF9O75901 435 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 MRPL17Q9NRX2 175 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 LRRIQ1Q96JM4 1722 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 GAKO14976 1311 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 SLC26A4O43511 780 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 NEK2P51955 445 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 C16orf89Q6UX73 402 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 CLIP3Q96DZ5 547 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 PAWRQ96IZ0 340 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 CRTAMO95727 393 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 DENND1CQ8IV53 801 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 LNPEPQ9UIQ6 1025 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 GSTM1P09488 218 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms