RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ZNF276Q8N554 614 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 UBA3Q8TBC4 463 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 KCNV2Q8TDN2 545 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 SPACA7Q96KW9 195 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 ULBP1Q9BZM6 244 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 UBXN6Q9BZV1 441 aa19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 HOOK1Q9UJC3 728 aaKnown RBP19.95■□□□□ 0.78
TM6SF1-201ENST00000258909 A0A1W2PQF6 199 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 LNP1A1A4G5 178 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 CORO1AP31146 461 aaKnown RBP19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 PTGER3P43115 390 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 SLC8A3P57103 927 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 COG7P83436 770 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 SGO2Q562F6 1265 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 KLHL10Q6JEL2 608 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 KIAA1211LQ6NV74 962 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 LPCAT2Q7L5N7 544 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 DEFB119Q8N690 84 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 CDK5RAP1Q96SZ6 601 aaKnown RBP19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 MARCH2Q9P0N8 246 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 RAD54BQ9Y620 910 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 CEP192Q8TEP8 1941 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 PLXND1Q9Y4D7 1925 aa19.94■□□□□ 0.78
TM6SF1-201ENST00000258909 TNRC6BQ9UPQ9 1833 aaKnown RBP19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 SLC12A8A0AV02 714 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 C4orf47A7E2U8 309 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 PSMA7O14818 248 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 KHNYNO15037 678 aaKnown RBP19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 ZBED1O96006 694 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 STIM1Q13586 685 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 DENND1CQ8IV53 801 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 ARHGAP18Q8N392 663 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 DDX1Q92499 740 aaKnown RBP19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 CACNA2D2Q9NY47 1150 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 CALCOCO1Q9P1Z2 691 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 AGO1Q9UL18 857 aaKnown RBP19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 PI4KAP42356 2102 aa19.93■□□□□ 0.78
TM6SF1-201ENST00000258909 WASH3PC4AMC7 463 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 XPO1O14980 1071 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 FMO5P49326 533 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 BCAT1P54687 386 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 IRX4P78413 519 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 ADIGQ0VDE8 80 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 CCDC40Q4G0X9 1142 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 PM20D1Q6GTS8 502 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 SDE2Q6IQ49 451 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 BHLHA9Q7RTU4 235 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 UBR7Q8N806 425 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 DHTKD1Q96HY7 919 aaPredicted RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 SLC6A17Q9H1V8 727 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 FAM124BQ9H5Z6 455 aaPredicted RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 LRRC4Q9HBW1 653 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 TMEM74BQ9NUR3 256 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 HESX1Q9UBX0 185 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 ATXN2Q99700 1313 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 BIN1O00499 593 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 GADD45BO75293 160 aaPredicted RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 CALCAP01258 141 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 BMP6P22004 513 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 YWHAEP62258 255 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 BST2Q10589 180 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 N4BP2L1Q5TBK1 243 aaPredicted RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 FYB2Q5VWT5 728 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 IPO4Q8TEX9 1081 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 EDEM1Q92611 657 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 KAT5Q92993 513 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 LSM14BQ9BX40 385 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 DCLK3Q9C098 648 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 METTL14Q9HCE5 456 aaKnown RBP19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 STRIP2Q9ULQ0 834 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 ZNF510Q9Y2H8 683 aa19.92■□□□□ 0.78
TM6SF1-201ENST00000258909 PPP1R3GB7ZBB8 358 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 PIK3R2O00459 728 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 PENKP01210 267 aaPredicted RBP19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 VDRP11473 427 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 NDUFV2P19404 249 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 CHKAP35790 457 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 BYSLQ13895 437 aaKnown RBP19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 GEN1Q17RS7 908 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 TMEM270Q6UE05 265 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 NELFBQ8WX92 580 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 TFAP2BQ92481 460 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 CEP63Q96MT8 703 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 IPO9Q96P70 1041 aaKnown RBP19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 GABRG3Q99928 467 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 GTPBP4Q9BZE4 634 aaKnown RBP19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 CD248Q9HCU0 757 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 CD93Q9NPY3 652 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 SFMBT1Q9UHJ3 866 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 FBXO10Q9UK96 956 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 CLEC4EQ9ULY5 219 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 PCDHB4Q9Y5E5 795 aa19.91■□□□□ 0.78
TM6SF1-201ENST00000258909 YJEFN3A6XGL0 299 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 E7ENQ6 273 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 RNF225M0QZC1 329 aaPredicted RBP19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 O00370 1275 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 LCP1P13796 627 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 ITPKAP23677 461 aa19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 TBXAS1P24557 533 aaPredicted RBP19.9■□□□□ 0.78
TM6SF1-201ENST00000258909 RGS7P49802 495 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms