RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 SLITRK1Q96PX8 696 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 WDCPQ9H6R7 721 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SLC25A13Q9UJS0 675 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 MAPRE3Q9UPY8 281 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SNX9Q9Y5X1 595 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 MGAT4DA6NG13 374 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RBP3P10745 1247 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ALOX15P16050 662 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 EPS8Q12929 822 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 FRG1Q14331 258 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 TIMM50Q3ZCQ8 353 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ANKS6Q68DC2 871 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RORBQ92753 470 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 EMILIN2Q9BXX0 1053 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CDC42EP4Q9H3Q1 356 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 KCND1Q9NSA2 647 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 POLR2AP24928 1970 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ALADP13716 330 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PGAM1P18669 254 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CACNB2Q08289 660 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SFSWAPQ12872 951 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 C10orf120Q5SQS8 335 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SCARA3Q6AZY7 606 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SLC26A11Q86WA9 606 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 REXO1L1PQ8IX06 675 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 WDR60Q8WVS4 1066 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 GANQ9H2C0 597 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 GNG14A0A1W2PPG7 69 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 DYRK3O43781 588 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 GSTM1P09488 218 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 FEN1P39748 380 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 NAA20P61599 178 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PRKAA1Q13131 559 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ZCCHC8Q6NZY4 707 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 KRT74Q7RTS7 529 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 MYO1HQ8N1T3 1032 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 AENQ8WTP8 325 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SERAC1Q96JX3 654 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ASB2Q96Q27 587 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PHACTR1Q9C0D0 580 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 AVENQ9NQS1 362 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RPS6KB2Q9UBS0 482 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 KDM3BQ7LBC6 1761 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ZNF142P52746 1687 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PRR23AA6NEV1 266 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 FAM20BO75063 409 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ITGA4P13612 1032 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 GYS1P13807 737 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RAG1P15918 1043 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CDK7P50613 346 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CSE1LP55060 971 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 NFIL3Q16649 462 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ARHGAP15Q53QZ3 475 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 YTHDF3Q7Z739 585 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 C10orf53Q8N6V4 93 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SEPT5Q99719 369 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 UBXN6Q9BZV1 441 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 REXO4Q9GZR2 422 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 KCTD10Q9H3F6 313 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SH3BP4Q9P0V3 963 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SLIT3O75094 1523 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PIPSLA2A3N6 862 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 POLRMTO00411 1230 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PHGDHO43175 533 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 TSC22D2O75157 780 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SERPINE1P05121 402 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 TRIM28Q13263 835 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SNAPC2Q13487 334 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SLC9A5Q14940 896 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ZC2HC1CQ53FD0 456 aaPredicted RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 STRIP1Q5VSL9 837 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 LAYNQ6UX15 382 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CASP12Q6UXS9 341 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 HERC6Q8IVU3 1022 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SNRNP27Q8WVK2 155 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RUSC1Q9BVN2 902 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ZCWPW1Q9H0M4 648 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 TIMMDC1Q9NPL8 285 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 KCNK4Q9NYG8 393 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 DAPK2Q9UIK4 370 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 NBPF26B4DH59 902 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 TXNP10599 105 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CHRM3P20309 590 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 ETFBP38117 255 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 SLC11A2P49281 568 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 CHN2P52757 468 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 HERVK_113P62684 666 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 NDUFAF6Q330K2 333 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 NBPF15Q8N660 670 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 MXRA8Q9BRK3 442 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PI4K2AQ9BTU6 479 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 YIPF2Q9BWQ6 316 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 PRDM16Q9HAZ2 1276 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RPRD1BQ9NQG5 326 aaKnown RBP4.93□□□□□ -1.62
RC3H1-201ENST00000258349 RGS18Q9NS28 235 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 GGA2Q9UJY4 613 aa4.93□□□□□ -1.62
RC3H1-201ENST00000258349 MROH1Q8NDA8 1641 aa4.92□□□□□ -1.62
RC3H1-201ENST00000258349 ANKRD31Q8N7Z5 1873 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms