RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 USP1O94782 785 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 USP17L7P0C7H9 530 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 MOXD1Q6UVY6 613 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 BNIPLQ7Z465 357 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 EGFRP00533 1210 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 CCR1P32246 355 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ABCG1P45844 678 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 TUBP50607 506 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 SEL1L3Q68CR1 1132 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 AADACL2Q6P093 401 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 MCOLN2Q8IZK6 566 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 REPS2Q8NFH8 660 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 SENP6Q9GZR1 1112 aaPredicted RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 ANKRD63C9JTQ0 380 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 SYNCRIPO60506 623 aaKnown RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 LTFP02788 710 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 VIL1P09327 827 aaKnown RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 MGAT1P26572 445 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 GSSP48637 474 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 DOK6Q6PKX4 331 aa19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 TRMT11Q7Z4G4 463 aaKnown RBP19.21■□□□□ 0.67
SMARCC1-201ENST00000254480 PRR23D1E9PI22 279 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 ZCCHC18P0CG32 403 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 PRR23D2P0DMB1 279 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 PSMA4P25789 261 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 BOP1Q14137 746 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 SLC39A12Q504Y0 691 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 LRRN4Q8WUT4 740 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 MGAT4DA6NG13 374 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 MEI4A8MW99 385 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 KRT16P08779 473 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 BDNFP23560 247 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 CCND1P24385 295 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 CNTN1Q12860 1018 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 DYNC1I2Q13409 638 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 OTOP1Q7RTM1 612 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 UCMAQ8WVF2 138 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 UBXN6Q9BZV1 441 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 WHRNQ9P202 907 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 BLOC1S6Q9UL45 172 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 KIAA1257Q9ULG3 409 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 IL1R1P14778 569 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 RUNX1T1Q06455 604 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 EHD4Q9H223 541 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 TLR8Q9NR97 1041 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 SAE1Q9UBE0 346 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 BARX2Q9UMQ3 279 aaPredicted RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 TIMM44O43615 452 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 PYGMP11217 842 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 TMBIM4Q9HC24 238 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 VPS9D1Q9Y2B5 631 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 RNASEH1O60930 286 aaKnown RBP19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 SSTR1P30872 391 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 KCNK18Q7Z418 384 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 LRRN4CLQ8ND94 238 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 GLIS3Q8NEA6 775 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 ROGDIQ9GZN7 287 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
SMARCC1-201ENST00000254480 MOXD2PA6NHM9 499 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 CRTAMO95727 393 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 SERPINB3P29508 390 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 ELK3P41970 407 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 PLK1P53350 603 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 TBX4P57082 545 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 ATP6AP1LQ52LC2 224 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 DAB2IPQ5VWQ8 1189 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 SUGP1Q8IWZ8 645 aaKnown RBP19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 NOD2Q9HC29 1040 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 CPA3P15088 417 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 STX5Q13190 355 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 TPGS1Q6ZTW0 290 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 EXD1Q8NHP7 514 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 RGS5O15539 181 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 DEAF1O75398 565 aaPredicted RBP19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 MARC1Q5VT66 337 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 ACOT9Q9Y305 439 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 DYRK1BQ9Y463 629 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 HES2Q9Y543 173 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 MAP3K13O43283 966 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 ACADMP11310 421 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 CYLC2Q14093 348 aaPredicted RBP19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 POM121L1PQ3SYA9 428 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 MYCBPAPQ8TBZ2 947 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 XPNPEP3Q9NQH7 507 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 TRPC4Q9UBN4 977 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 DLG4P78352 724 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 PRKCQQ04759 706 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 BTG3Q14201 252 aaPredicted RBP19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 EFL1Q7Z2Z2 1120 aaKnown RBP19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 MAGEB18Q96M61 343 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 ACTR8Q9H981 624 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 PALMDQ9NP74 551 aa19.19■□□□□ 0.66
SMARCC1-201ENST00000254480 SLC2A4P14672 509 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 AGKQ53H12 422 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 CBWD3Q5JTY5 395 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 CBWD5Q5RIA9 395 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 WLSQ5T9L3 541 aa19.18■□□□□ 0.66
SMARCC1-201ENST00000254480 ELOA2Q8IYF1 753 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms