RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MGAT5Q09328 741 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 CDH17Q12864 832 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SCUBE2Q9NQ36 999 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SOAT2O75908 522 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 DNAL1Q4LDG9 190 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 LVRNQ6Q4G3 990 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 CCDC149Q6ZUS6 474 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 DDIASQ8IXT1 998 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 RIN2Q8WYP3 895 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 ETNK1Q9HBU6 452 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 OR6C75A6NL08 312 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 EPHB6O15197 1021 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 PMM2O15305 246 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 ESRRBO95718 433 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 GNRH1P01148 92 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SLC39A12Q504Y0 691 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 KDM4CQ9H3R0 1056 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 STK25O00506 426 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 RHOBTB1O94844 696 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 FAM107AO95990 144 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 HOXB8P17481 243 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 TNFRSF8P28908 595 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SKIV2LQ15477 1246 aaKnown RBP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 ZRANB3Q5FWF4 1079 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 ANKZF1Q9H8Y5 726 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 NOP53Q9NZM5 478 aaKnown RBP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 RBPJLQ9UBG7 517 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 VPS28Q9UK41 221 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 SLC39A10Q9ULF5 831 aa15.47■□□□□ 0.07
UBE4B-201ENST00000253251 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.47■□□□□ 0.07
UBE4B-201ENST00000253251 MEFVO15553 781 aaPredicted RBP15.46■□□□□ 0.07
UBE4B-201ENST00000253251 ANP32DO95626 131 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 SERPINF2P08697 491 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 CCDC130P13994 396 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 PPM1AP35813 382 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 TUSC3Q13454 348 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 FAXCQ5TGI0 409 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 DDI1Q8WTU0 396 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 MANSC1Q9H8J5 431 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 GDF3Q9NR23 364 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 RBM22Q9NW64 420 aaKnown RBP eCLIP15.46■□□□□ 0.074e-7■■■■□ 22.3
UBE4B-201ENST00000253251 B4GALT5O43286 388 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 ASMTLO95671 621 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 THEMIS2Q5TEJ8 643 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 TMCO4Q5TGY1 634 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 IRAK4Q9NWZ3 460 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 IPPQ9Y573 584 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 RGPD5Q99666 1765 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 SEPT4O43236 478 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 CA12O43570 354 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 RHOAP61586 193 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 ITGA7Q13683 1181 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 EDEM1Q92611 657 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 RIC8BQ9NVN3 520 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 DMAC2Q9NW81 257 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 STK39Q9UEW8 545 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 Q9Y3F1 56 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 RAD54BQ9Y620 910 aa15.46■□□□□ 0.07
UBE4B-201ENST00000253251 VPS26AO75436 327 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 BDNFP23560 247 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TUBP50607 506 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 PREPLQ4J6C6 727 aaPredicted RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 GJC2Q5T442 439 aaPredicted RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TRIM68Q6AZZ1 485 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 ECT2Q9H8V3 914 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TRMT6Q9UJA5 497 aaKnown RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TSHRP16473 764 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 ITGALP20701 1170 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 IRAK1P51617 712 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 AGGF1Q8N302 714 aaeCLIP15.45■□□□□ 0.063e-8■■■■□ 22.1
UBE4B-201ENST00000253251 CARNMT1Q8N4J0 409 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 UPF1Q92900 1129 aaKnown RBP eCLIP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 SYTL2Q9HCH5 934 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 PCDHGB4Q9UN71 923 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 ARHGDIAP52565 204 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 MROH9Q5TGP6 573 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 SENP6Q9GZR1 1112 aaPredicted RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 AFF4Q9UHB7 1163 aaKnown RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 PCYOX1Q9UHG3 505 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TRPC5OSA6NMA1 111 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 XPO1O14980 1071 aaKnown RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 DRG2P55039 364 aaKnown RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 C1orf146Q5VVC0 180 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 BLOC1S5Q8TDH9 187 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 ZNF670Q9BS34 389 aa15.45■□□□□ 0.06
UBE4B-201ENST00000253251 PDGFDQ9GZP0 370 aaPredicted RBP15.45■□□□□ 0.06
UBE4B-201ENST00000253251 TM9SF1O15321 606 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CD52P31358 61 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 C9orf57Q5W0N0 161 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 LENG9Q96B70 501 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 SRPK1Q96SB4 655 aaKnown RBP15.44■□□□□ 0.06
UBE4B-201ENST00000253251 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 CYLDQ9NQC7 956 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 VANGL2Q9ULK5 521 aa15.44■□□□□ 0.06
UBE4B-201ENST00000253251 ZNF862O60290 1169 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms