RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 SPANXN3Q5MJ09 141 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 TRPM8Q7Z2W7 1104 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 TLK2Q86UE8 772 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 C19orf60Q96EN9 201 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 CNDP1Q96KN2 507 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 ACOT9Q9Y305 439 aa7.55□□□□□ -1.2
SSR1-201ENST00000244763 LRRIQ1Q96JM4 1722 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PQBP1O60828 265 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 CTSEP14091 401 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 INSRRP14616 1297 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ATP6V1C1P21283 382 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SLC16A1P53985 500 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SMARCB1Q12824 385 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PGM5Q15124 567 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TRIM71Q2Q1W2 868 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 MDH1BQ5I0G3 518 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 OTOAQ7RTW8 1153 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TRMT11Q7Z4G4 463 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 FAM163AQ96GL9 167 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 CPB2Q96IY4 423 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZSWIM1Q9BR11 485 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ATXN3LQ9H3M9 355 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 MTA2O94776 668 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 POLR2EP19388 210 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 GRK4P32298 578 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PAGE2BQ5JRK9 111 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ICE2Q659A1 982 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PRMT9Q6P2P2 845 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ACER1Q8TDN7 264 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 DNAJB3Q8WWF6 145 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CYGBQ8WWM9 190 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CNBD2Q96M20 576 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 MAF1Q9H063 256 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 VANGL2Q9ULK5 521 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PIK3C2BO00750 1634 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CPS1P31327 1500 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CEP170BQ9Y4F5 1589 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 ERN1O75460 977 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 ATP5C1P36542 298 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 FMR1Q06787 632 aaKnown RBP eCLIP7.54□□□□□ -1.2
SSR1-201ENST00000244763 GIT2Q14161 759 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CCDC153Q494R4 210 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ILDR2Q71H61 639 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 DEFB128Q7Z7B8 93 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZNF473Q8WTR7 871 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 RXFP2Q8WXD0 754 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PABPC3Q9H361 631 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 KLC4Q9NSK0 619 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 USE1Q9NZ43 259 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 URADA6NGE7 173 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 HS6ST1O60243 411 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PDHA1P08559 390 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 PAEPP09466 180 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ARP10275 920 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CHKAP35790 457 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 HNRNPH2P55795 449 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 SLC29A2Q14542 456 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 C11orf88Q6PI97 169 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 BTNL9Q6UXG8 535 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CLEC10AQ8IUN9 316 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CAMKK1Q8N5S9 505 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ARMC2Q8NEN0 867 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 VTI1BQ9UEU0 232 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TECPR2O15040 1411 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CASTOR2A6NHX0 329 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 RAD51CO43502 376 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 VPS4BO75351 444 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 HMGCRP04035 888 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 BTKQ06187 659 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 LYPLAL1Q5VWZ2 237 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ACTRT1Q8TDG2 376 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ADI1Q9BV57 179 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.54□□□□□ -1.22e-9■■■■■ 37.6
SSR1-201ENST00000244763 PARVBQ9HBI1 364 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 GPAMQ9HCL2 828 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 KBTBD4Q9NVX7 518 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZNF232Q9UNY5 417 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 DIP2BQ9P265 1576 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 H7C0S8 307 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CBX4O00257 560 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZNF185O15231 689 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ZBTB14O43829 449 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 RARGP13631 454 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CDK16Q00536 496 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 CDH17Q12864 832 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 ATP6AP1LQ52LC2 224 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 GSPT2Q8IYD1 628 aaKnown RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 C4orf33Q8N1A6 199 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 TMEM134Q9H6X4 195 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 STMN3Q9NZ72 180 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 MORC2Q9Y6X9 1032 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 GNG14A0A1W2PPG7 69 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 B2RBV5 119 aa7.54□□□□□ -1.2
SSR1-201ENST00000244763 SEC24DO94855 1032 aaPredicted RBP7.54□□□□□ -1.2
SSR1-201ENST00000244763 SETMARQ53H47 684 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms