RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CCDC183Q5T5S1 534 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 DCAF12L1Q5VU92 463 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 FAM124AQ86V42 546 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 NELFCDQ8IXH7 590 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 CCDC65Q8IXS2 484 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 OVCA2Q8WZ82 227 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 SNX19Q92543 992 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 PAGE5Q96GU1 130 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 CGRRF1Q99675 332 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 GABRG3Q99928 467 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 DMAP1Q9NPF5 467 aaPredicted RBP14.56□□□□□ -0.08
DDX39A-201ENST00000242776 TM7SF3Q9NS93 570 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 STON1Q9Y6Q2 735 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 ATP8B3O60423 1300 aa14.56□□□□□ -0.08
DDX39A-201ENST00000242776 NUMA1Q14980 2115 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 ASXL3Q9C0F0 2248 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 KCNJ18B7U540 433 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 CACNG3O60359 315 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 CBFA2T3O75081 653 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 CILPO75339 1184 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 BEST1O76090 585 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 HOXD13P35453 343 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 MATKP42679 507 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 MAP3K7CLP57077 242 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 ASIC1P78348 528 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 ACOT1Q86TX2 421 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 RHBDD1Q8TEB9 315 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 ZNF516Q92618 1163 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 CCDC47Q96A33 483 aaKnown RBP14.55□□□□□ -0.08
DDX39A-201ENST00000242776 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 C7orf25Q9BPX7 421 aa14.55□□□□□ -0.08
DDX39A-201ENST00000242776 KLF16Q9BXK1 252 aaPredicted RBP14.55□□□□□ -0.08
DDX39A-201ENST00000242776 EIF2B4Q9UI10 523 aaKnown RBP14.55□□□□□ -0.08
DDX39A-201ENST00000242776 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDX39A-201ENST00000242776 SETXQ7Z333 2677 aaKnown RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 FRMD3A2A2Y4 597 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 KCNK3O14649 394 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 KIAA0391O15091 583 aaKnown RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 SMC2O95347 1197 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 CASP4P49662 377 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 BNC1Q01954 994 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 STARD3Q14849 445 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 HLA-BQ31612 363 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 CAVIN1Q6NZI2 390 aaKnown RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 CNNM4Q6P4Q7 775 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 SDCBP2Q9H190 292 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.082e-6■■■■■ 32
DDX39A-201ENST00000242776 FAM49BQ9NUQ9 324 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 WSB2Q9NYS7 404 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 WDR35Q9P2L0 1181 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
DDX39A-201ENST00000242776 BTBD3Q9Y2F9 522 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 KNL1Q8NG31 2342 aa14.54□□□□□ -0.08
DDX39A-201ENST00000242776 TP53BP1Q12888 1972 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-201ENST00000242776 A0A1B0GVT2 93 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 TRABD2BA6NFA1 517 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 BCAT2O15382 392 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-201ENST00000242776 GREM1O60565 184 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 CISD3P0C7P0 127 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 TUBP50607 506 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 CYP24A1Q07973 514 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 BIRC3Q13489 604 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 PNOCQ13519 176 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 PSMD6Q15008 389 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 CAMK4Q16566 473 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 SNX30Q5VWJ9 437 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 STXBP4Q6ZWJ1 553 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 HTR3DQ70Z44 454 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 GPRIN1Q7Z2K8 1008 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 GRAMD1CQ8IYS0 662 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 ZMIZ2Q8NF64 920 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 P2RY11Q96G91 374 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 SMARCD1Q96GM5 515 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 SMOQ99835 787 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 ZDHHC5Q9C0B5 715 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 MKRN2Q9H000 416 aaKnown RBP14.53□□□□□ -0.08
DDX39A-201ENST00000242776 TLR8Q9NR97 1041 aaKnown RBP14.53□□□□□ -0.08
DDX39A-201ENST00000242776 AGPAT3Q9NRZ7 376 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 OSER1Q9NX31 292 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 TOR4AQ9NXH8 423 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 SLCO1B1Q9Y6L6 691 aa14.53□□□□□ -0.08
DDX39A-201ENST00000242776 CYP26A1O43174 497 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 CER1O95813 267 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 HMBSP08397 361 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 ZDHHC11BP0C7U3 371 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 PRR29P0C7W0 189 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 ADORA2BP29275 332 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 ATP5C1P36542 298 aaKnown RBP14.52□□□□□ -0.08
DDX39A-201ENST00000242776 IL12RB1P42701 662 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 CSNK1EP49674 416 aaKnown RBP14.52□□□□□ -0.08
DDX39A-201ENST00000242776 TPMTP51580 245 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 DPYDQ12882 1025 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 GEN1Q17RS7 908 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 ZNF699Q32M78 642 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 LAYNQ6UX15 382 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 UNC13DQ70J99 1090 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 TMPRSS7Q7RTY8 843 aa14.52□□□□□ -0.08
DDX39A-201ENST00000242776 FUKQ8N0W3 1084 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms