RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 PGAP3Q96FM1 320 aaPredicted RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 PCED1BQ96HM7 432 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 B3GNT5Q9BYG0 378 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 SMARCAL1Q9NZC9 954 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 CACNG4Q9UBN1 327 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 ADAM28Q9UKQ2 775 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 DRG1Q9Y295 367 aaKnown RBP13.76□□□□□ -0.21
SLIRP-201ENST00000238688 USTQ9Y2C2 406 aa13.76□□□□□ -0.21
SLIRP-201ENST00000238688 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 RRP9O43818 475 aaKnown RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 AP1G2O75843 785 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 ENDOD1O94919 500 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 TRUB2O95900 331 aaKnown RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 F9P00740 461 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 RARAP10276 462 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 RALAP11233 206 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 ZFXP17010 805 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 MIPP30301 263 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 CA8P35219 290 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 PLA2G5P39877 138 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 CDKN2BP42772 138 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 MAGEA11P43364 429 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 OR1G1P47890 313 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 ZXDAP98168 799 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 GUCY2DQ02846 1103 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 MTMR3Q13615 1198 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 SLC25A52Q3SY17 297 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 BBS12Q6ZW61 710 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 JAMLQ86YT9 394 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC105Q8IYK2 499 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC89Q8N998 374 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 NKD2Q969F2 451 aaPredicted RBP13.75□□□□□ -0.21
SLIRP-201ENST00000238688 SLC2A13Q96QE2 648 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 PAAF1Q9BRP4 392 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 ZNF670Q9BS34 389 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 FUT8Q9BYC5 575 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 FOXP3Q9BZS1 431 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 POPDC2Q9HBU9 364 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 EPB41L5Q9HCM4 733 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 CHST7Q9NS84 486 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 COMMD8Q9NX08 183 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 AMACRQ9UHK6 382 aa13.75□□□□□ -0.21
SLIRP-201ENST00000238688 LRRD1A4D1F6 860 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 C2CD4DB7Z1M9 353 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 SMAPO00193 183 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 TADA2AO75478 443 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 SP100P23497 879 aaPredicted RBP13.74□□□□□ -0.21
SLIRP-201ENST00000238688 KDELR1P24390 212 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 FLT3P36888 993 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 RGS7P49802 495 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 ADIGQ0VDE8 80 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 MTA1Q13330 715 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 ZFYVE27Q5T4F4 411 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 DUPD1Q68J44 220 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 PM20D1Q6GTS8 502 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 KIAA1841Q6NSI8 718 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 TRIM67Q6ZTA4 783 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 SCUBE3Q8IX30 993 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 RXFP1Q9HBX9 757 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 DZANK1Q9NVP4 752 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 OGFRQ9NZT2 677 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 WHRNQ9P202 907 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 NOTCH4Q99466 2003 aa13.74□□□□□ -0.21
SLIRP-201ENST00000238688 CACNA1HO95180 2353 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MYBPHLA2RUH7 354 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 APOC4-APOC2K7ER74 178 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 TRIM66O15016 1216 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 TEX28O15482 410 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 APOC2P02655 101 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ITGAVP06756 1048 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 FGFR3P22607 806 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 PTGIRP43119 386 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 DAOAP59103 153 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 DSG1Q02413 1049 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 PTK6Q13882 451 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MRPL58Q14197 206 aaKnown RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 DPYSL2Q16555 572 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ACBD5Q5T8D3 534 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ALS2CLQ60I27 953 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 CES5AQ6NT32 575 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 FUT10Q6P4F1 479 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 MFSD7Q6UXD7 560 aa13.73□□□□□ -0.21
SLIRP-201ENST00000238688 ANKS3Q6ZW76 656 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms