RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 STAT5BP51692 787 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TAP1Q03518 808 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CYLC2Q14093 348 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 PRKD1Q15139 912 aaPredicted RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TAZQ16635 292 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDO1Q16878 200 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CES4AQ5XG92 561 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 EEF1DP3Q658K8 133 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 C1orf228Q6PIY5 440 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 ALYREFQ86V81 257 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRAPPC12Q8WVT3 735 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 USP6NLQ92738 828 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 CFAP36Q96G28 342 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 BTBD10Q9BSF8 475 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 BRD8Q9H0E9 1235 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 UGT1A7Q9HAW7 530 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 UGT1A10Q9HAW8 530 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 UGT1A8Q9HAW9 530 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 SAR1AQ9NR31 198 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 KRT82Q9NSB4 513 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 TAS2R1Q9NYW7 299 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 BTBD7Q9P203 1132 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 RBMX2Q9Y388 322 aaKnown RBP9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 SIP14410 1827 aa9.74□□□□□ -0.85
HLA-DOA-201ENST00000229829 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MEI4A8MW99 385 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CYB561D2O14569 222 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 OGTO15294 1046 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 FARP2O94887 1054 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ASLP04424 464 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 DHRS4L1P0CG22 281 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MYL2P10916 166 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 GJA8P48165 433 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 AP1B1Q10567 949 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PRKG1Q13976 671 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 HADHQ16836 314 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 HSF5Q4G112 596 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 RABGAP1LQ5R372 815 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRNP1Q6NT89 227 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 DARS2Q6PI48 645 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZPBP2Q6X784 338 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ANKRD23Q86SG2 305 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CTAGE3PQ8IX95 158 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 UBA3Q8TBC4 463 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 SKA1Q96BD8 255 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MRPL4Q9BYD3 311 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 USP18Q9UMW8 372 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF510Q9Y2H8 683 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TSC22D4Q9Y3Q8 395 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TEX264Q9Y6I9 313 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CENPFP49454 3210 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 IGKV6D-21A0A0A0MT36 114 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 APOC4-APOC2K7ER74 178 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MCF2LO15068 1137 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MAFO75444 373 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 APOC2P02655 101 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PRKCBP05771 671 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CXCL8P10145 99 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TCF7P36402 384 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 YWHAEP62258 255 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ZNF200P98182 395 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 OCRLQ01968 901 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 LAMTOR4Q0VGL1 99 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ASPHQ12797 758 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 LSAMPQ13449 338 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TNFAIP1Q13829 316 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 LY6KQ17RY6 165 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PABPC1LQ4VXU2 614 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ARHGAP24Q8N264 748 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCDC33Q8N5R6 958 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPM1NQ8N819 430 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CMASQ8NFW8 434 aaPredicted RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 SLC44A1Q8WWI5 657 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 MTBPQ96DY7 904 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 NSL1Q96IY1 281 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CATSPER2Q96P56 530 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ECSITQ9BQ95 431 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 NMUR2Q9GZQ4 415 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PPCSQ9HAB8 311 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 GPATCH2LQ9NWQ4 482 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 FETUBQ9UGM5 382 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PACSIN3Q9UKS6 424 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CCDC195A0A1B0GUA6 201 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TRUB2O95900 331 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TOP3BO95985 862 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 C1QAP02745 245 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 INHBAP08476 426 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 CDH6P55285 790 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 BMPR2Q13873 1038 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 TTC13Q8NBP0 860 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 GATA6Q92908 595 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 GCNAQ96QF7 691 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 KLHL4Q9C0H6 718 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 ELOVL4Q9GZR5 314 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 LIN28AQ9H9Z2 209 aaKnown RBP9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 PLAC1Q9HBJ0 212 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 RAB6BQ9NRW1 208 aa9.73□□□□□ -0.85
HLA-DOA-201ENST00000229829 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms