RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 NR1H4Q96RI1 486 aaPredicted RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 UBP1Q9NZI7 540 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 BLOC1S6Q9UL45 172 aa11.86□□□□□ -0.51
NOD1-201ENST00000222823 DRG1Q9Y295 367 aaKnown RBP11.86□□□□□ -0.51
NOD1-201ENST00000222823 PSMD10O75832 226 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 NUMBP49757 651 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 BFSP2Q13515 415 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 AARS2Q5JTZ9 985 aaKnown RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 EDEM1Q92611 657 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 KAT5Q92993 513 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 PRPF18Q99633 342 aaKnown RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 DNALI1O14645 258 aaPredicted RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 TPST1O60507 370 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 NOL4O94818 638 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ENDOD1O94919 500 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 KCNA3P22001 575 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 EIF4BP23588 611 aaKnown RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 GRK2P25098 689 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ELK3P41970 407 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 OXCT1P55809 520 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 DYNC1I2Q13409 638 aaKnown RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 BMPR2Q13873 1038 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ITIH4Q14624 930 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 KBTBD12Q3ZCT8 623 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 CYB5D1Q6P9G0 228 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
NOD1-201ENST00000222823 KAT2BQ92831 832 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ECSITQ9BQ95 431 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 EFCAB1Q9HAE3 211 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 MYO1GB0I1T2 1018 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 POMCP01189 267 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 PAEPP09466 180 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 THRAP10827 490 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 MBL2P11226 248 aaPredicted RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 CPA3P15088 417 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 PTPRAP18433 802 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ADORA2AP29274 412 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 CCR1P32246 355 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 RPL21P46778 160 aaKnown RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 ARHGAP15Q53QZ3 475 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 TATDN1Q6P1N9 297 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 ILDR2Q71H61 639 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 CCDC60Q8IWA6 550 aaPredicted RBP11.85□□□□□ -0.51
NOD1-201ENST00000222823 FAM136AQ96C01 138 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 FAR2Q96K12 515 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 NOD2Q9HC29 1040 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 CYP4F12Q9HCS2 524 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 SLIT2O94813 1529 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 AKAP11Q9UKA4 1901 aa11.85□□□□□ -0.51
NOD1-201ENST00000222823 FAM95CA0A1B0GW59 222 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 LACTBL1A8MY62 500 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 RIPK2O43353 540 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 EGFRP00533 1210 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ALDH2P05091 517 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 PECAM1P16284 738 aaPredicted RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 AQP5P55064 265 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ADIGQ0VDE8 80 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 DDX39BQ13838 428 aaKnown RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 NBPF20Q3BBV1 942 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 TMC3Q7Z5M5 1100 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 RBBP8Q99708 897 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 HSD17B14Q9BPX1 270 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 FGFBP2Q9BYJ0 223 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 NCKIPSDQ9NZQ3 722 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SPASTQ9UBP0 616 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 DNAJC16Q9Y2G8 782 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 EPS8L1Q8TE68 723 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SEPT8Q92599 483 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 INPP5DQ92835 1189 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 CNDP1Q96KN2 507 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 THUMPD3Q9BV44 507 aaKnown RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 NT5MQ9NPB1 228 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 C4AP0C0L4 1744 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 C4BP0C0L5 1744 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 TTMPQ5BVD1 217 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 MARC1Q5VT66 337 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SEL1L3Q68CR1 1132 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 LRRC8BQ6P9F7 803 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 FOXR1Q6PIV2 292 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 NT5DC4Q86YG4 428 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 ZDHHC17Q8IUH5 632 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 CYGBQ8WWM9 190 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 CELF6Q96J87 481 aaKnown RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 GLIS2Q9BZE0 524 aaPredicted RBP11.84□□□□□ -0.51
NOD1-201ENST00000222823 UBXN6Q9BZV1 441 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 PORCNQ9H237 461 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 GPAMQ9HCL2 828 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 STARD7Q9NQZ5 370 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 VPS28Q9UK41 221 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 RNF112Q9ULX5 631 aa11.84□□□□□ -0.51
NOD1-201ENST00000222823 SOX13Q9UN79 622 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms