RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 TPD52L3Q96J77 140 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 CPSF1Q10570 1443 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 RPN2P04844 631 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 OVGP1Q12889 678 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 PLD1Q13393 1074 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ZCWPW2Q504Y3 356 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 CYP20A1Q6UW02 462 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 MPZL3Q6UWV2 235 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 PTAR1Q7Z6K3 402 aaPredicted RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 KIFC1Q9BW19 673 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ZCCHC2Q9C0B9 1178 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 ZNF862O60290 1169 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ACSL4O60488 711 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 PLEKHH3Q7Z736 793 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 GANQ9H2C0 597 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 CCNT2O60583 730 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 KLK7P49862 253 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 CASP12Q6UXS9 341 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 HEATR4Q86WZ0 1026 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ATG4CQ96DT6 458 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 KLHL25Q9H0H3 589 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ERI2A8K979 691 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 IRX1P78414 480 aaPredicted RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 FAM172AQ8WUF8 416 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 USP18Q9UMW8 372 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 DUSP12Q9UNI6 340 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 SIK3Q9Y2K2 1263 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 IFNGR2P38484 337 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 MAPKAPK2P49137 400 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 CSHL1Q14406 222 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ZNF280DQ6N043 979 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 TPCN2Q8NHX9 752 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 DPY30Q9C005 99 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 TRIT1Q9H3H1 467 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 SPTLC1O15269 473 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 TM9SF1O15321 606 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 PARNO95453 639 aaKnown RBP15.26■□□□□ 0.03
UBR5-201ENST00000220959 TMEM159Q96B96 161 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 FAM20BO75063 409 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 FBXO21O94952 628 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ACADSP16219 412 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 ITGB6P18564 788 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 MYL12AP19105 171 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 FXR1P51114 621 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■■■□□ 17.2
UBR5-201ENST00000220959 FAM228AQ86W67 206 aa15.26■□□□□ 0.03
UBR5-201ENST00000220959 RAD51BO15315 384 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 FCGR1AP12314 374 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 MAD2L1Q13257 205 aaPredicted RBP15.25■□□□□ 0.03
UBR5-201ENST00000220959 SLC13A5Q86YT5 568 aaPredicted RBP15.25■□□□□ 0.03
UBR5-201ENST00000220959 KLHL1Q9NR64 748 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 NCKIPSDQ9NZQ3 722 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KPNA6O60684 536 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 ACOX1Q15067 660 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 CACTIN-AS1Q8N1I8 211 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 IGDCC4Q8TDY8 1250 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 STK39Q9UEW8 545 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SCNN1BP51168 640 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SCUBE1Q8IWY4 988 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 ATG7O95352 703 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KRT6AP02538 564 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KRT6BP04259 564 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KRT6CP48668 564 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 RENBPP51606 427 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 ANKS1AQ92625 1134 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 THAP2Q9H0W7 228 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 MFSD1Q9H3U5 465 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 VAV3Q9UKW4 847 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 LAMC1P11047 1609 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 A0A087WZ62 844 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 ZNF839A8K0R7 811 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 MPP3Q13368 585 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 FBXO36Q8NEA4 188 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KCNB2Q92953 911 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 KANSL3Q9P2N6 904 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■■ 55.6
UBR5-201ENST00000220959 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 TRIM43BA6NCK2 446 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 NAA30Q147X3 362 aaPredicted RBP15.25■□□□□ 0.03
UBR5-201ENST00000220959 H7C0S8 307 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SNPHO15079 494 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 BIRC5O15392 142 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SMNDC1O75940 238 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBR5-201ENST00000220959 NDUFAF6Q330K2 333 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
UBR5-201ENST00000220959 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
UBR5-201ENST00000220959 CASTOR2A6NHX0 329 aa15.24■□□□□ 0.03
UBR5-201ENST00000220959 CTSEP14091 401 aa15.24■□□□□ 0.03
UBR5-201ENST00000220959 PEG10Q86TG7 708 aaKnown RBP15.24■□□□□ 0.03
UBR5-201ENST00000220959 APOL2Q9BQE5 337 aa15.24■□□□□ 0.03
UBR5-201ENST00000220959 KATNA1O75449 491 aa15.24■□□□□ 0.03
UBR5-201ENST00000220959 SGPL1O95470 568 aa15.24■□□□□ 0.03
UBR5-201ENST00000220959 VAV1P15498 845 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms