RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 PARVAQ9NVD7 372 aa27.81■■■□□ 2.04
STUB1-201ENST00000219548 TRIOO75962 3097 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 ANKRD62A6NC57 917 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 SIGLEC16A6NMB1 481 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 LCA5LO95447 670 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 H2AFZP0C0S5 128 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 NOS2P35228 1153 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 USP4Q13107 963 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 ZNF77Q15935 545 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 H2AFVQ71UI9 128 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 LRRC8AQ8IWT6 810 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 ADAM33Q9BZ11 813 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 CFAP97Q9P2B7 532 aa27.8■■■□□ 2.04
STUB1-201ENST00000219548 ECI2O75521 394 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 TRUB2O95900 331 aaKnown RBP27.79■■■□□ 2.04
STUB1-201ENST00000219548 TFE3P19532 575 aaPredicted RBP27.79■■■□□ 2.04
STUB1-201ENST00000219548 GRM2Q14416 872 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 OTUD1Q5VV17 481 aaPredicted RBP27.79■■■□□ 2.04
STUB1-201ENST00000219548 ARCQ7LC44 396 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 RXFP2Q8WXD0 754 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 CFAP57Q96MR6 1250 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 DDX23Q9BUQ8 820 aaKnown RBP27.79■■■□□ 2.04
STUB1-201ENST00000219548 FAM204AQ9H8W3 233 aa27.79■■■□□ 2.04
STUB1-201ENST00000219548 SYNJ2BP-COX16A0A087WUM0 186 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 C2CD4BA6NLJ0 364 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 EIF3CLB5ME19 914 aaKnown RBP27.78■■■□□ 2.04
STUB1-201ENST00000219548 SULT1E1P49888 294 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 GPC5P78333 572 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 DCUN1D2Q6PH85 259 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 BPIFB1Q8TDL5 484 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 CTNNBL1Q8WYA6 563 aaPredicted RBP27.78■■■□□ 2.04
STUB1-201ENST00000219548 EIF3CQ99613 913 aaKnown RBP27.78■■■□□ 2.04
STUB1-201ENST00000219548 COX16Q9P0S2 106 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 STAP1Q9ULZ2 295 aa27.78■■■□□ 2.04
STUB1-201ENST00000219548 IGLV3-25P01717 112 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 PDGFRAP16234 1089 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 SPA17Q15506 151 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 E2F7Q96AV8 911 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 SERPINB11Q96P15 392 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 TBCBQ99426 244 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 NPY6RQ99463 290 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 TRIM7Q9C029 511 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 CD320Q9NPF0 282 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 DDIT4Q9NX09 232 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 OBP2AQ9NY56 170 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 MYOFQ9NZM1 2061 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 CALCOCO1Q9P1Z2 691 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 IGSF9Q9P2J2 1179 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 SCINQ9Y6U3 715 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 TTC28Q96AY4 2481 aa27.77■■■□□ 2.04
STUB1-201ENST00000219548 M0QYT0 321 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 IRAK2O43187 625 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 STC2O76061 302 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 CYP1A2P05177 515 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 PTMAP06454 111 aaKnown RBP27.76■■■□□ 2.04
STUB1-201ENST00000219548 TCF3P15923 654 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 MAGEA1P43355 309 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 COG7P83436 770 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 NME3Q13232 169 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 DDX42Q86XP3 938 aaKnown RBP eCLIP27.76■■■□□ 2.04
STUB1-201ENST00000219548 MFSD6LQ8IWD5 586 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 ACRBPQ8NEB7 543 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 CCDC112Q8NEF3 446 aa27.76■■■□□ 2.04
STUB1-201ENST00000219548 REXO2Q9Y3B8 237 aaKnown RBP27.76■■■□□ 2.04
STUB1-201ENST00000219548 HBS1LQ9Y450 684 aaKnown RBP27.76■■■□□ 2.04
STUB1-201ENST00000219548 MUC3AQ02505 3323 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 TICRRQ7Z2Z1 1910 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 TMEM253P0C7T8 217 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 GPD1P21695 349 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 SDC4P31431 198 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 TBX4P57082 545 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 ATP11AP98196 1134 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 OGDHQ02218 1023 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 TRIP4Q15650 581 aaPredicted RBP27.76■■■□□ 2.03
STUB1-201ENST00000219548 C15orf59Q2T9L4 293 aaPredicted RBP27.76■■■□□ 2.03
STUB1-201ENST00000219548 SLC25A52Q3SY17 297 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 CCDC14Q49A88 953 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 NT5C3BQ969T7 300 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 DESI2Q9BSY9 194 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 NUP85Q9BW27 656 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 MRPL47Q9HD33 250 aaKnown RBP27.76■■■□□ 2.03
STUB1-201ENST00000219548 TFR2Q9UP52 801 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 SH3BP1Q9Y3L3 701 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 PCDHA13Q9Y5I0 950 aa27.76■■■□□ 2.03
STUB1-201ENST00000219548 BDP1A6H8Y1 2624 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 IPO7O95373 1038 aaKnown RBP27.75■■■□□ 2.03
STUB1-201ENST00000219548 PSMC3P17980 439 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 CCZ1BP86790 482 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 CCZ1P86791 482 aaPredicted RBP27.75■■■□□ 2.03
STUB1-201ENST00000219548 CDO1Q16878 200 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 C10orf76Q5T2E6 689 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 GJD3Q8N144 294 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 SLC44A3Q8N4M1 653 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 DEPDC1BQ8WUY9 529 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 NXPE3Q969Y0 559 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 ZFYVE19Q96K21 471 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 RRN3Q9NYV6 651 aa27.75■■■□□ 2.03
STUB1-201ENST00000219548 TMEM191CA6NGB0 347 aa27.74■■■□□ 2.03
STUB1-201ENST00000219548 ATXN1P54253 815 aaKnown RBP27.74■■■□□ 2.03
STUB1-201ENST00000219548 FCHO2Q0JRZ9 810 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms