RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TBC1D16Q8TBP0 767 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 C9orf72Q96LT7 481 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 OSBPL11Q9BXB4 747 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 TMEM216Q9P0N5 145 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 EFR3BQ9Y2G0 817 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 PRG3Q9Y2Y8 225 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 MFHAS1Q9Y4C4 1052 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SLC30A1Q9Y6M5 507 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CAPN6Q9Y6Q1 641 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SAGE2PA6NJ88 616 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 UBOX5O94941 541 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 HMGCRP04035 888 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SERPINA6P08185 405 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 AQP5P55064 265 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 BST2Q10589 180 aaKnown RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 CDH17Q12864 832 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 NAA30Q147X3 362 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 C6orf10Q5SRN2 563 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 IZUMO2Q6UXV1 221 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 ZNF572Q7Z3I7 529 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 MIER2Q8N344 545 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CDC26Q8NHZ8 85 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 TATDN2Q93075 761 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 TMEM237Q96Q45 408 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 CINPQ9BW66 212 aaPredicted RBP4.54□□□□□ -1.68
CHD9-201ENST00000219084 SEMA6BQ9H3T3 888 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 DPP3Q9NY33 737 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 HAO1Q9UJM8 370 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 DNPEPQ9ULA0 475 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 SPACA6W5XKT8 324 aa4.54□□□□□ -1.68
CHD9-201ENST00000219084 LCA5LO95447 670 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC4A1P02730 911 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ATP6V1C1P21283 382 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 AKT1P31749 480 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CACNA2D1P54289 1103 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 NR1H2P55055 460 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RTP1P59025 263 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SNAPC2Q13487 334 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ARHGEF7Q14155 803 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 BMT2Q1RMZ1 405 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TRIM71Q2Q1W2 868 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TJAP1Q5JTD0 557 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CEP78Q5JTW2 689 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FKBP1CQ5VVH2 108 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FAM92BQ6ZTR7 304 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 OR6Y1Q8NGX8 325 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CKAP2Q8WWK9 683 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CELF1Q92879 486 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLITRK1Q96PX8 696 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 METTL5Q9NRN9 209 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TMCC3Q9ULS5 477 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 AGAP1Q9UPQ3 857 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ACOT9Q9Y305 439 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 BBIP1A8MTZ0 92 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MLNP12872 115 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 CES1P23141 567 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 HTR7P34969 479 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SEC24CP53992 1094 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 VPS72Q15906 364 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PDK4Q16654 411 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SPANXN2Q5MJ10 180 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 LYPLAL1Q5VWZ2 237 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 LPCAT2Q7L5N7 544 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ADHFE1Q8IWW8 467 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MCOLN2Q8IZK6 566 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 FUKQ8N0W3 1084 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZNF786Q8N393 782 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KIF2BQ8N4N8 673 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 AP3S1Q92572 193 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC5A5Q92911 643 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 ABHD8Q96I13 439 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TMEM161AQ9NX61 479 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 BARX2Q9UMQ3 279 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 G3BP2Q9UN86 482 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLIT2O94813 1529 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GAKO14976 1311 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MED1Q15648 1581 aaPredicted RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 TCRBV5S4A2TA0A5A2 114 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 RNF103O00237 685 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 UBDO15205 165 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KRT6BP04259 564 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GLI1P08151 1106 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 MMP10P09238 476 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 JAK1P23458 1154 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PRDX6P30041 224 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 KRT6CP48668 564 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SQLEQ14534 574 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SPATS1Q496A3 300 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 PTRHD1Q6GMV3 140 aaKnown RBP4.53□□□□□ -1.68
CHD9-201ENST00000219084 ZBTB49Q6ZSB9 765 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 NUP93Q8N1F7 819 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SNX31Q8N9S9 440 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 C19orf18Q8NEA5 215 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 GDPD5Q8WTR4 605 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 Q96MT0 163 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 TMEM79Q9BSE2 394 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 SLC39A10Q9ULF5 831 aa4.53□□□□□ -1.68
CHD9-201ENST00000219084 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.53□□□□□ -1.68
CHD9-201ENST00000219084 NAALADL1Q9UQQ1 740 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms