RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 BRCC3P46736 316 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 CACNA2D1P54289 1103 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 AIF1P55008 147 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 SLC45A4Q5BKX6 768 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 INTS6LQ5JSJ4 861 aaKnown RBP30.8■■■□□ 2.52
PABPN1-201ENST00000216727 TRAF7Q6Q0C0 670 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 TADA2BQ86TJ2 420 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 CYP4X1Q8N118 509 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 FRMD8Q9BZ67 464 aaPredicted RBP30.8■■■□□ 2.52
PABPN1-201ENST00000216727 CCDC134Q9H6E4 229 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 FETUBQ9UGM5 382 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 CLUHO75153 1309 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 ARHGEF37A1IGU5 675 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 I3L4J1 428 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 GNRH1P01148 92 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 GOT1P17174 413 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 PHBP35232 272 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 GPX6P59796 221 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 SLC10A2Q12908 348 aaPredicted RBP30.8■■■□□ 2.52
PABPN1-201ENST00000216727 NR1H3Q13133 447 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 NCBP2-AS2Q69YL0 99 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 DCLRE1AQ6PJP8 1040 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 GPRIN1Q7Z2K8 1008 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 TAB3Q8N5C8 712 aaPredicted RBP30.8■■■□□ 2.52
PABPN1-201ENST00000216727 RSPH1Q8WYR4 309 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 MAML1Q92585 1016 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 MYLPFQ96A32 169 aa30.8■■■□□ 2.52
PABPN1-201ENST00000216727 YJEFN3A6XGL0 299 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 E7ENQ6 273 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 MAGEA6P43360 314 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 DEUP1Q05D60 604 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 ANKMY2Q8IV38 441 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 PYROXD2Q8N2H3 581 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 SLC43A3Q8NBI5 491 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 PKMYT1Q99640 499 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 SLC24A2Q9UI40 661 aa30.79■■■□□ 2.52
PABPN1-201ENST00000216727 BANF1O75531 89 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 TRPA1O75762 1119 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 EOMESO95936 686 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 PAN2Q504Q3 1202 aaKnown RBP30.78■■■□□ 2.52
PABPN1-201ENST00000216727 VSTM1Q6UX27 236 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 BZW1Q7L1Q6 419 aaKnown RBP30.78■■■□□ 2.52
PABPN1-201ENST00000216727 PGAP3Q96FM1 320 aaPredicted RBP30.78■■■□□ 2.52
PABPN1-201ENST00000216727 QKIQ96PU8 341 aaKnown RBP eCLIP30.78■■■□□ 2.522e-13■■□□□ 11.4
PABPN1-201ENST00000216727 WDR83Q9BRX9 315 aaKnown RBP30.78■■■□□ 2.52
PABPN1-201ENST00000216727 RAB6BQ9NRW1 208 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 RRN3Q9NYV6 651 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 HTTP42858 3142 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 CAPN9O14815 690 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 IBSPP21815 317 aaPredicted RBP30.78■■■□□ 2.52
PABPN1-201ENST00000216727 AMPD1P23109 780 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 NTAN1Q96AB6 310 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 SUSD3Q96L08 255 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 KLC2Q9H0B6 622 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 TRPV6Q9H1D0 765 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 ARHGEF4Q9NR80 690 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 PIGVQ9NUD9 493 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 DTLQ9NZJ0 730 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 TBK1Q9UHD2 729 aa30.78■■■□□ 2.52
PABPN1-201ENST00000216727 GCATO75600 419 aa30.77■■■□□ 2.52
PABPN1-201ENST00000216727 MAP3K6O95382 1288 aa30.77■■■□□ 2.52
PABPN1-201ENST00000216727 FBXO36Q8NEA4 188 aa30.77■■■□□ 2.52
PABPN1-201ENST00000216727 OLFM3Q96PB7 478 aa30.77■■■□□ 2.52
PABPN1-201ENST00000216727 SF3B1O75533 1304 aaKnown RBP eCLIP30.77■■■□□ 2.525e-8■■■■■ 42.1
PABPN1-201ENST00000216727 HACD1B0YJ81 288 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 H3BRJ5 948 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 USP17L7P0C7H9 530 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 TYMPP19971 482 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 EFHC2Q5JST6 749 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 LHX8Q68G74 356 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 KCNT2Q6UVM3 1135 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 SLC24A5Q71RS6 500 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 SPATS2Q86XZ4 545 aaKnown RBP30.76■■■□□ 2.52
PABPN1-201ENST00000216727 SCML4Q8N228 414 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 RNF139Q8WU17 664 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 IRGQQ8WZA9 623 aa30.76■■■□□ 2.52
PABPN1-201ENST00000216727 TMEM120BA0PK00 339 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 C5orf60A6NFR6 353 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 LTFP02788 710 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 CREB1P16220 341 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 RABGGTBP53611 331 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 NME3Q13232 169 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 MAPRE1Q15691 268 aaKnown RBP30.76■■■□□ 2.51
PABPN1-201ENST00000216727 BBS9Q3SYG4 887 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 BHLHA9Q7RTU4 235 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 RTN4RL1Q86UN2 441 aaPredicted RBP30.76■■■□□ 2.51
PABPN1-201ENST00000216727 CHMP6Q96FZ7 201 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 PNPLA8Q9NP80 782 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 CREBZFQ9NS37 354 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 ETNK2Q9NVF9 386 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 RABGEF1Q9UJ41 708 aa30.76■■■□□ 2.51
PABPN1-201ENST00000216727 BRAFP15056 766 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 SCAPQ12770 1279 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 MBTPS1Q14703 1052 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 OVOS1Q6IE37 1185 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 GLB1LQ6UWU2 654 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 THEM5Q8N1Q8 247 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 SLC7A14Q8TBB6 771 aa30.75■■■□□ 2.51
PABPN1-201ENST00000216727 ZNF317Q96PQ6 595 aaPredicted RBP30.75■■■□□ 2.51
PABPN1-201ENST00000216727 WDR6Q9NNW5 1121 aaKnown RBP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms