RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 FAM47CQ5HY64 1035 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 NME8Q8N427 588 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CFAP61Q8NHU2 1237 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 THTPAQ9BU02 230 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 NRDE2Q9H7Z3 1164 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 PLAC1Q9HBJ0 212 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SSC5DA1L4H1 1573 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 UBAP2LQ14157 1087 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CAPRIN2Q6IMN6 1127 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 RSPH3Q86UC2 560 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 TP53INP2Q8IXH6 220 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CCDC185Q8N715 623 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SMC1BQ8NDV3 1235 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SHKBP1Q8TBC3 707 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 TTC1Q99614 292 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 GBA2Q9HCG7 927 aaPredicted RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 ENO4A6NNW6 628 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CREB3O43889 395 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 GOT1P17174 413 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 MRPS5P82675 430 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 ZNF618Q5T7W0 954 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 LCLAT1Q6UWP7 414 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 AP4E1Q9UPM8 1137 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 MTO1Q9Y2Z2 717 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 NME7Q9Y5B8 376 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SCN1AP35498 2009 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CHADO15335 359 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 GAS2O43903 313 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 KRT38O76015 456 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 APOEP02649 317 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SOWAHAQ2M3V2 549 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 LGSNQ5TDP6 509 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 HEATR6Q6AI08 1181 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 OLFML1Q6UWY5 402 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CXorf38Q8TB03 319 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 DNAJC9Q8WXX5 260 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 DCPSQ96C86 337 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 SETD4Q9NVD3 440 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 CACNG4Q9UBN1 327 aa8.58□□□□□ -1.04
CDC27-201ENST00000066544 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
CDC27-201ENST00000066544 KCNK1O00180 336 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 LGR5O75473 907 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 RFPL1O75677 317 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 CNMDO75829 334 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 MCF2P10911 925 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 LMO2P25791 158 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SLC6A3Q01959 620 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 AP1B1Q10567 949 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 R3HDM1Q15032 1099 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 ARMCX2Q7L311 632 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 CATSPER4Q7RTX7 472 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 RPAINQ86UA6 219 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 TEX9Q8N6V9 391 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 USP6NLQ92738 828 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 EIF2AQ9BY44 585 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 CYP3A43Q9HB55 503 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 PLLPQ9Y342 182 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 MLH1P40692 756 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 PDE1BQ01064 536 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SLC18A2Q05940 514 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 LRRC36Q1X8D7 754 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 PPM1JQ5JR12 505 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 CCDC124Q96CT7 223 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 OSMRQ99650 979 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 FRMD8P1Q9BZ68 369 aaPredicted RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 DONSONQ9NYP3 566 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 PRR5-ARHGAP8B1AHC4 643 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 TBX10O75333 385 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SAT1P21673 171 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 ACAT1P24752 427 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 PGGT1BP53609 377 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 ARHGAP8P85298 464 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 TNFAIP2Q03169 654 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 UCMAQ8WVF2 138 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.043e-7■■□□□ 11.9
CDC27-201ENST00000066544 PPP1R36Q96LQ0 422 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 APOL2Q9BQE5 337 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 ASB7Q9H672 318 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 CYP4F11Q9HBI6 524 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SSU72Q9NP77 194 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 SAR1AQ9NR31 198 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 NMRK1Q9NWW6 199 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 RGS17Q9UGC6 210 aaPredicted RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 NVLO15381 856 aaKnown RBP8.57□□□□□ -1.04
CDC27-201ENST00000066544 DHRS4L1P0CG22 281 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 GNAZP19086 355 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 EPHB1P54762 984 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 SLC8A3P57103 927 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 NME3Q13232 169 aa8.57□□□□□ -1.04
CDC27-201ENST00000066544 TSNAXIP1Q2TAA8 658 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms